Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 >seq3 Length=8560927 Score = 127 bits (140), Expect = 2e-24 Identities = 225/325 (69%), Gaps = 11/325 (3%) Strand=Plus/Plus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 ||||| || |||||| ||| |||||||||| || |||||| ||||| || | | Sbjct 3180673 GCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCAGCGATCTTCTGGCTC 3180732 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | ||| || | |||||||||||||| || ||||||||| ||||| | || || Sbjct 3180733 AAGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTCCCGTGATGAG 3180792 Query 47268 GGCCTGCACACCAACTTTGCCTGTCTC-TACTACAACACTAGAGTCGATCAAAAGTTGGA 47326 || |||| || ||||||| || ||| | | ||||| || | || || || Sbjct 3180793 GGTATGCATACGGACTTTGCATGCCTCTTGATGCAACA----TCTCAAGCACAAACCCGA 3180848 Query 47327 CGTGCCCACCGTCAGCG---ACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTT 47383 | || | ||| || |||| | ||||||| ||| ||||| | |||||| | Sbjct 3180849 C---CCAAAACTCATCGAAAACATTATCACCGAAGCTGTCAAGATTGAAAAAGAGTTTCT 3180905 Query 47384 CGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACAT 47443 | |||| || || |||| || || |||| ||||| || || | ||| | | ||||| Sbjct 3180906 CACCGATGCCCTCCCCGTCTCATTGTTGGGCATGAATTCGAAGCTCATGTGTCAATACAT 3180965 Query 47444 CGAATTTGTCGCCGACCGCCTGCTC 47468 ||| ||||||||||||||||||||| Sbjct 3180966 CGAGTTTGTCGCCGACCGCCTGCTC 3180990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500300724160