Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4 161 1e-34 seq3 96.9 4e-15 >seq4 Length=4919768 Score = 161 bits (178), Expect = 1e-34 Identities = 1115/1763 (63%), Gaps = 63/1763 (4%) Strand=Plus/Plus Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608 ||| ||| || || |||||||| || |||||||||||| ||||| | | |||| Sbjct 3840967 GCCATTGTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGC 3841026 Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAG---GTTCATACTTTGGGAT 115665 || | | |||| | || || |||| | ||| | ||| | | ||||| Sbjct 3841027 ATGCTAGTGATCTTGCCCATGGTCGG---TTCCTTCAAGTGAATGTTGAGAGACTGGGAC 3841083 Query 115666 TGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTC 115724 |||||||||||| || || ||||| ||||| | | || ||| | || |||||| Sbjct 3841084 TGATCGATGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCT-GATTTC 3841142 Query 115725 CCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGA 115784 |||||| || | ||||| || || || | ||||| | ||| || ||||| || Sbjct 3841143 CCACACGGTCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGA 3841202 Query 115785 GCCACCTGCCTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAA--TCTTC 115839 ||| ||| | | | |||| ||| |||||||| | ||||| || || | || | Sbjct 3841203 GCCGCCTTC---GGCTATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAAC 3841259 Query 115840 TTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 115895 | ||||||| || | | | | || || || || || || || ||| || Sbjct 3841260 T--AGATCCTTCAGCAACCATGGG----TTAACGACTTGGAATTCTCCGGCAAGGACACG 3841313 Query 115896 TCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGG 115954 | ||| ||||| || | ||||||||| || || || || ||||| || | || || | Sbjct 3841314 GCG-AGAGTAGATATTTGACGTGTATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAG 3841372 Query 115955 CTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAA 116014 || ||||| || ||||| || || | || || |||||| | || || Sbjct 3841373 AGGTCGAGGCAGTAGGCATAGGGGCGACAAGCAGAGAGTTGCGAACGCCATGTTTGGCAA 3841432 Query 116015 TGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAA 116074 | | || | || |||||| || | | | | | | |||||| || Sbjct 3841433 TCTCGGCTTTCAAGGAGTCCCAATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGT 3841492 Query 116075 ACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT 116134 | || || || || || || | || ||||| |||| ||||| | |||| ||| Sbjct 3841493 ATTGAAGAATGCCCTGTGAGACGGGGCTGCCCTCGTATGTTTCATAGGTTCCCTGCTCCT 3841552 Query 116135 CCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 116194 || | |||| | || ||| || || || || || || ||||| || || || Sbjct 3841553 TGGCGAGTTCGCAAGAGGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATAT 3841612 Query 116195 TCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA-AATAAATACATCCGC 116252 ||| |||||| ||||||| || ||||| | ||||| || | || || |||| || Sbjct 3841613 TCAGTTGCCT-GGCCTCGGGAGAGTCAAAGGGAAGACG-CAGAGCAAGGAAGGCATCGGC 3841670 Query 116253 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC 116312 ||||||||| || || || || | || ||||||| | || ||| || Sbjct 3841671 GAGACCTTGAACGCCCAGACCGACAGGCCGATGTCGGAAGTTGCTCTTCTTTGCTTCGGG 3841730 Query 116313 CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 116372 |||||||| | || ||||||| | | | ||||| || ||||| || | || | Sbjct 3841731 AACGGGATAGTAGTTGATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTAC 3841790 Query 116373 TTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAG 116429 |||||||| | | ||| | || |||| || || || | |||| || Sbjct 3841791 CTCATGAAGACGACCAAAGTCATATTCACCTCGAGCCTGATCCACGA---AGGTAGGGAG 3841847 Query 116430 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489 |||| || |||||||| ||||||| | ||| || | | || | || | ||| || Sbjct 3841848 AGCGAGGGAGGCCAGATTGCACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTC 3841907 Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549 || || | ||||| || ||||| ||||||||||| || || |||| | || || Sbjct 3841908 GGTGCAGAGGTTTGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCA 3841967 Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609 || |||||||| ||||| || || ||||| ||||| || || | || ||| ||||| | Sbjct 3841968 GGCGTCCTTGTAAAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATA 3842027 Query 116610 CCATA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 ||||| | || | ||| || | ||||| | || ||||||| |||||| | Sbjct 3842028 CCATAGCTTCTG-GGCCTTAACCGTCTGGCG--ACCACGTCCCTCCTTCTCGTATCTCTC 3842084 Query 116667 GTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGAC 116725 ||| || ||| || || || ||| || | || | || || || |||| || || | Sbjct 3842085 GTACAGTTCCTTGAAGTCGTC-GCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGC 3842143 Query 116726 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 116785 ||||||| | ||| | || ||| || || | |||||| | ||| || |||| | Sbjct 3842144 AGAAGAGTGTCCACTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACA 3842203 Query 116786 GCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 116845 | || |||| | || || | | ||||| | || || || |||| | || Sbjct 3842204 GGGCATAGAACAAGTCGCGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCA 3842263 Query 116846 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC 116905 | ||||| | | || |||||||| ||||| ||||| | || | | | ||| ||| Sbjct 3842264 AGAAGTCGAAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGC-AAAGGCACCT--GGAC 3842320 Query 116906 G------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAA 116959 | ||| |||||| || || | || || ||| || ||||||||||| || | Sbjct 3842321 GCTTGTTACCGCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGA 3842380 Query 116960 TGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGA--CAT 117016 ||| ||||| || |||||| ||||| |||| || | || |||| | | || Sbjct 3842381 TGAGACCATTGGAGGTGCCATTGGTCCCTGCAATATAGGATCCTG-TGGCACGAATGCAA 3842439 Query 117017 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGAC 117076 | | || || | |||||||| || || ||| || || || || | ||||| Sbjct 3842440 TGGGCAT-TG-AGGCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAG 3842497 Query 117077 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 117136 || | ||||| || ||||| ||| | || | | || | ||||||| |||| | Sbjct 3842498 TGTCATAGATGCCCTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCT 3842557 Query 117137 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTGG 117195 | || ||||| || || ||||| || || |||| |||||| |||| || | ||| Sbjct 3842558 GAGGTTGAGGTGTTCCGGCATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTC-TGG 3842616 Query 117196 GACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAG 117255 ||||| | ||||||||| | | || ||| || || |||||||| | || Sbjct 3842617 GACATGAGGTTGTAGGTCTCAATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCC 3842676 Query 117256 ACCCGCATAAACATGTATTGGGG 117278 || ||||| | ||||| |||||| Sbjct 3842677 ACACGCATGAGCATGTGTTGGGG 3842699 >seq3 Length=8560927 Score = 96.9 bits (106), Expect = 4e-15 Identities = 184/270 (68%), Gaps = 6/270 (2%) Strand=Plus/Minus Query 127537 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 127596 |||||| ||||||||||| || || || ||||| || || ||||| || ||| | Sbjct 3180795 ACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAGGCCGGGCATCAGGCCCTTGCT 3180736 Query 127597 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 127656 ||| | |||||| ||||| ||| || |||||||||||||| || || || || || Sbjct 3180735 CTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCAAA 3180676 Query 127657 CGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTAT---CAAACCACTTCATCGCCCA 127713 |||| || |||| ||||| ||| |||| | ||| | | ||| || ||||| Sbjct 3180675 AGCAACTAACCGCTGGGCAA---AGCTCGACTCTTTATCTGCGATCCATCGCAAAGCCCA 3180619 Query 127714 CTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTC 127773 | ||| || || || ||||||| || | || || |||||||| | |||| || Sbjct 3180618 GTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGTCAAAGAGATATGTCTTCTC 3180559 Query 127774 TGATGGATCTTTGATGTACTTATCTATGAG 127803 | ||||| || | ||| | || ||||| Sbjct 3180558 TTTGGGATCCTTCACATACGTGTCAATGAG 3180529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506555817440