Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4 127 3e-24
>seq4
Length=4919768
Score = 127 bits (140), Expect = 3e-24
Identities = 415/636 (65%), Gaps = 8/636 (1%)
Strand=Plus/Plus
Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG 203943
||||||||||||||||||||| || ||| | | ||| || | |||||| || |
Sbjct 3840978 CAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGCTAGTGAT 3841037
Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003
|||| || | | || || || ||||||||| ||||||||| || |||||||| ||
Sbjct 3841038 CTTGCCCATGGTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGATGAA-GG 3841096
Query 204004 CGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGA 204062
| || || || || ||||| | | | ||| || || |||||||| |||||
Sbjct 3841097 CACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCTGATTTCCCACACGGTCTTAT 3841156
Query 204063 ACACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCC 204121
| | || || ||| | || | | | | || ||| ||||||||| |||||
Sbjct 3841157 AGAGAGCTTTGATGTCTGCGGGGATGT-TGGGGATGTTCTGGATCGAGCCGCCTTCGGCT 3841215
Query 204122 ATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGG 204181
|| | || || || | | || ||||| |||||| | || ||| || ||
Sbjct 3841216 ATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAACTAGATCCTTCAGCAAC 3841275
Query 204182 TGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTG 204241
||||| | || || || ||||||| || || | || | | | | || |||
Sbjct 3841276 CATGGGTTAACGACTTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTGACGTG 3841335
Query 204242 AATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGA 204301
|||||||||| ||||||||||| | |||||||| ||| ||| || ||||| ||
Sbjct 3841336 TATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGG 3841395
Query 204302 GCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGG-ACCCTGCGC-TTCAGAGAGGTCC 204359
|| | ||||| |||||||| || || || ||||| | || || |||| ||| ||
Sbjct 3841396 GCGACAAGCAGAGAGTTGCGAACGCC--ATGTTTGGCAATCTCGGCTTTCAAGGAGTCCC 3841453
Query 204360 AGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGA 204419
| || || | ||| | ||| |||||||||| | |||| ||||| || ||
Sbjct 3841454 AATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTGAGA 3841513
Query 204420 CTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGG 204479
| |||||||||| ||| || ||| | | ||| | || || | ||| ||||| |
Sbjct 3841514 CGGGGCTGCCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAG 3841573
Query 204480 CCATGGCGTGATAGTACATGGTCTCAAAGATCTGAA 204515
| || || ||| ||||| |||||||| ||||
Sbjct 3841574 TGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAA 3841609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154365087040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |