Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4 127 3e-24 >seq4 Length=4919768 Score = 127 bits (140), Expect = 3e-24 Identities = 415/636 (65%), Gaps = 8/636 (1%) Strand=Plus/Plus Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG 203943 ||||||||||||||||||||| || ||| | | ||| || | |||||| || | Sbjct 3840978 CAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGCTAGTGAT 3841037 Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003 |||| || | | || || || ||||||||| ||||||||| || |||||||| || Sbjct 3841038 CTTGCCCATGGTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGATGAA-GG 3841096 Query 204004 CGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGA 204062 | || || || || ||||| | | | ||| || || |||||||| ||||| Sbjct 3841097 CACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCTGATTTCCCACACGGTCTTAT 3841156 Query 204063 ACACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCC 204121 | | || || ||| | || | | | | || ||| ||||||||| ||||| Sbjct 3841157 AGAGAGCTTTGATGTCTGCGGGGATGT-TGGGGATGTTCTGGATCGAGCCGCCTTCGGCT 3841215 Query 204122 ATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGG 204181 || | || || || | | || ||||| |||||| | || ||| || || Sbjct 3841216 ATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAACTAGATCCTTCAGCAAC 3841275 Query 204182 TGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTG 204241 ||||| | || || || ||||||| || || | || | | | | || ||| Sbjct 3841276 CATGGGTTAACGACTTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTGACGTG 3841335 Query 204242 AATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGA 204301 |||||||||| ||||||||||| | |||||||| ||| ||| || ||||| || Sbjct 3841336 TATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGG 3841395 Query 204302 GCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGG-ACCCTGCGC-TTCAGAGAGGTCC 204359 || | ||||| |||||||| || || || ||||| | || || |||| ||| || Sbjct 3841396 GCGACAAGCAGAGAGTTGCGAACGCC--ATGTTTGGCAATCTCGGCTTTCAAGGAGTCCC 3841453 Query 204360 AGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGA 204419 | || || | ||| | ||| |||||||||| | |||| ||||| || || Sbjct 3841454 AATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTGAGA 3841513 Query 204420 CTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGG 204479 | |||||||||| ||| || ||| | | ||| | || || | ||| ||||| | Sbjct 3841514 CGGGGCTGCCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAG 3841573 Query 204480 CCATGGCGTGATAGTACATGGTCTCAAAGATCTGAA 204515 | || || ||| ||||| |||||||| |||| Sbjct 3841574 TGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAA 3841609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154365087040