Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 2e-29
seq9 98.7 2e-15
seq7 93.3 1e-13
>seq3
Length=8560927
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|| ||| | ||| ||||| |||||| |||| ||||||||||| || |||| || ||
Sbjct 4894882 CAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTC 4894941
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||| |||||| ||||| ||||| || ||||| |||||||| ||| ||||| ||
Sbjct 4894942 TTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGAATGCCTTCCTTGTC 4895001
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||||||| ||| ||| |||| ||||| | | || || |||| ||| |||||
Sbjct 4895002 CTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTAATCGT 4895061
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| ||||| | |||||||||||| || ||
Sbjct 4895062 CTTTCCCGTCAAAGTTTTCACAAAGATCTG 4895091
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || ||||||||||| |||| ||||||||| || |||| |||||
Sbjct 4895339 AGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCC 4895398
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||| || |||||||| ||||| ||||||||||| ||| ||| || ||| |||
Sbjct 4895399 TCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCC 4895458
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || || | ||||| |||
Sbjct 4895459 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTC 4895518
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | |||||||| || || ||
Sbjct 4895519 TTGCCAGTCAAGGTTTTCACGAAGATCTG 4895547
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| || || |||||||| ||||| ||||| |||| ||| ||||| | | ||| | ||
Sbjct 4895107 TCTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCC 4895166
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| |||| ||||| || || ||||| || ||||| |||||||| || |||||
Sbjct 4895167 ATCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTT 4895226
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| ||| |||| ||||| | | || || || | ||||||
Sbjct 4895227 GTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGAT 4895286
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||| ||||| | |||||||| || || ||
Sbjct 4895287 CGTCTTCCCCGTCAAGGTTTTCACGAAGATCTG 4895319
>seq9
Length=3042725
Score = 98.7 bits (108), Expect = 2e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || ||| ||||||||||| || ||||| |||| |||||||| | | ||
Sbjct 1318709 CGAAGGCGCAAGACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAGAGGGTG 1318768
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||| || ||||| || |||||||| || ||||||||||||||| ||| |||
Sbjct 1318769 CGACCGTCTTCAAGTTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCT 1318828
Query 199529 TC 199530
||
Sbjct 1318829 TC 1318830
>seq7
Length=2048283
Score = 93.3 bits (102), Expect = 1e-13
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| || ||| | || ||||| |||||||| ||||||||||
Sbjct 22036 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGA 21977
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| | ||||||||||| || || ||||| ||||| ||||| ||| || |
Sbjct 21976 TCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 21917
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || || | ||||| ||||| |||||||| || || || |
Sbjct 21916 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 21857
Query 199620 A 199620
|
Sbjct 21856 A 21856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178920331185628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |