Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3 154 1e-32
seq7 105 7e-18
>seq3
Length=8560927
Score = 154 bits (170), Expect = 1e-32
Identities = 166/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| | || ||||| |||||||| | || |||||| ||| |
Sbjct 4895550 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 4895491
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || |||| ||||||||||| ||||| |||||||
Sbjct 4895490 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGACCA 4895432
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||||| ||| ||||||||||| || || | || || || | |||||||||
Sbjct 4895431 GCAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGCGACTACAA 4895372
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| |||||||||| |||| || |||
Sbjct 4895371 CATCCAGAAGGAGTCGACGCTGCACCTGGTCCTCCGT 4895335
Score = 116 bits (128), Expect = 4e-21
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| | ||||| || || ||||| |||| || ||| | ||
Sbjct 4895322 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACGATCACGCTCGAAGTTGAGTCGTCC 4895263
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361
|||| || | | | | |||| || |||| ||||| || || || ||||||| |||
Sbjct 4895262 GACA-CGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCAT-CCCGCCGGACC 4895205
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| || || | |||||||| || |||| || | || || ||| |||||| |
Sbjct 4895204 AACAGCGCCTGATCTTTGCGGGCAAGCAATTGGAGGATGGCCGAACTCTCTCCGACTATA 4895145
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||| |||||| ||||||| || ||||||| | || | ||||||
Sbjct 4895144 ACATCCAGAAGGAATCGACGCTCCACCTGGTGCTCAGATTACGCGGCGGC 4895095
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || ||||| | ||||| || || || || | || || ||| | |
Sbjct 4895094 ATGCAGATCTTTGTGAAAACTTTGACGGGAAAGACGATTACGCTGGAGGTGGAGAGCTCG 4895035
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| || | | | | |||| || || | ||||| || || ||||| | |||||
Sbjct 4895034 GACA-CGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGCATTCCGCCGGACCA 4894976
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| || || | || ||||| ||| |||| |||| || || || ||||||||
Sbjct 4894975 ACAGCGCCTGATCTTTGCCGGCAAGCAGTTGGAAGACGGCCGGACGCTGTCTGACTACAA 4894916
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| ||||| ||| || || || ||||| |||| ||| | |||||||
Sbjct 4894915 CATCCAGAAGGAGAGC-ACTCTACACTTGGTCTTGCGGTTGCGTGGCGGCC 4894866
>seq7
Length=2048283
Score = 105 bits (116), Expect = 7e-18
Identities = 139/189 (74%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 38248 AAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305
||||| ||||| || || ||||||||||| ||||||||| |||| |||||| | ||||
Sbjct 21849 AAATAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGA 21908
Query 38306 CAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAAC 38364
|| | | | | || || |||| ||||| || || || |||||| ||||| |
Sbjct 21909 CACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCAT-CCCGCCTGACCAGC 21967
Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424
|||| | || | ||| ||||| ||||| || |||| || || || | |||||||||||
Sbjct 21968 AGCGCTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTGAGCGACTACAACA 22027
Query 38425 TCCAAAAGG 38433
|||| ||||
Sbjct 22028 TCCAGAAGG 22036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172274818560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |