Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 154 1e-32 seq7 105 7e-18 >seq3 Length=8560927 Score = 154 bits (170), Expect = 1e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | || ||||| |||||||| | || |||||| ||| | Sbjct 4895550 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 4895491 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||||||||| ||||| ||||||| Sbjct 4895490 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGACCA 4895432 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| ||||||||||| || || | || || || | ||||||||| Sbjct 4895431 GCAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGCGACTACAA 4895372 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||||||||| |||| || ||| Sbjct 4895371 CATCCAGAAGGAGTCGACGCTGCACCTGGTCCTCCGT 4895335 Score = 116 bits (128), Expect = 4e-21 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | ||||| || || ||||| |||| || ||| | || Sbjct 4895322 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACGATCACGCTCGAAGTTGAGTCGTCC 4895263 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| || | | | | |||| || |||| ||||| || || || ||||||| ||| Sbjct 4895262 GACA-CGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCAT-CCCGCCGGACC 4895205 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || || | |||||||| || |||| || | || || ||| |||||| | Sbjct 4895204 AACAGCGCCTGATCTTTGCGGGCAAGCAATTGGAGGATGGCCGAACTCTCTCCGACTATA 4895145 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| |||||| ||||||| || ||||||| | || | |||||| Sbjct 4895144 ACATCCAGAAGGAATCGACGCTCCACCTGGTGCTCAGATTACGCGGCGGC 4895095 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| | ||||| || || || || | || || ||| | | Sbjct 4895094 ATGCAGATCTTTGTGAAAACTTTGACGGGAAAGACGATTACGCTGGAGGTGGAGAGCTCG 4895035 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || || | ||||| || || ||||| | ||||| Sbjct 4895034 GACA-CGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGCATTCCGCCGGACCA 4894976 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | || ||||| ||| |||| |||| || || || |||||||| Sbjct 4894975 ACAGCGCCTGATCTTTGCCGGCAAGCAGTTGGAAGACGGCCGGACGCTGTCTGACTACAA 4894916 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| || || || ||||| |||| ||| | ||||||| Sbjct 4894915 CATCCAGAAGGAGAGC-ACTCTACACTTGGTCTTGCGGTTGCGTGGCGGCC 4894866 >seq7 Length=2048283 Score = 105 bits (116), Expect = 7e-18 Identities = 139/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 38248 AAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 ||||| ||||| || || ||||||||||| ||||||||| |||| |||||| | |||| Sbjct 21849 AAATAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGA 21908 Query 38306 CAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAAC 38364 || | | | | || || |||| ||||| || || || |||||| ||||| | Sbjct 21909 CACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCAT-CCCGCCTGACCAGC 21967 Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424 |||| | || | ||| ||||| ||||| || |||| || || || | ||||||||||| Sbjct 21968 AGCGCTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTGAGCGACTACAACA 22027 Query 38425 TCCAAAAGG 38433 |||| |||| Sbjct 22028 TCCAGAAGG 22036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172274818560