Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6 129 2e-24 >seq6 Length=1908156 Score = 129 bits (142), Expect = 2e-24 Identities = 245/357 (69%), Gaps = 14/357 (4%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 |||||||| || || | ||||||||| ||| ||||| ||| || || ||| || Sbjct 1119963 CCTGAAGAGATCTCCGCCATGGTTCTTGGTAAGATGAAGGAAGTCGCGGAGGCATACCTT 1120022 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || ||| || | ||||| | || || || || ||||||||||| || || || Sbjct 1120023 GGCAAGAAAGTCACCCACGCAGTTGTCACCGTCCCAGCATATTTCAATGACGCCCAGCGA 1120082 Query 451364 CAAGCAACTAAAGATGCAGG-ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 ||||| || || ||||| || ||| ||||| ||||| | |||||| || || | || || Sbjct 1120083 CAAGCCACCAAGGATGCTGGCACA-ATTGCCGGTTTGACTGTTCTGCGTGTTGTCAACGA 1120141 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAG---AAACAGAAGaaaa 451479 ||||| || || ||| | || || || || | || | ||| ||| ||| ||| Sbjct 1120142 GCCTACTGCCGCAGCTATCGCCTACGGTCTCG----ATAAGAAGGGCAAAGAGAGTCAAA 1120197 Query 451480 aaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGA 451539 || |||| ||| ||||||| || ||| |||| ||| | ||||| ||||| Sbjct 1120198 TCATTGTTTA-----CGATCTTGGTGGTGGGACTTTTGATGTTTCCCTTCTTTCGATTGA 1120252 Query 451540 AGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 |||||| || || || || ||| ||| |||||| |||||||| || || ||||| Sbjct 1120253 AGATGGCGTCTTCGAGGTTTTGGCTACCGCTGGTGACACTCATCTTGGTGGCGAAGA 1120309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975716273633072