Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 152 6e-32 seq3 140 4e-28 seq6 86.0 8e-12 >seq4 Length=4919768 Score = 152 bits (168), Expect = 6e-32 Identities = 570/876 (65%), Gaps = 27/876 (3%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| ||||||| || || | ||||| ||||| || || |||| | | | |||| Sbjct 3842692 ACATGCTCATGCGTGTGGCAGTTGGTATTCATGGCGACGACGTTGAAAAGGCTATTGAGA 3842633 Query 111679 CATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | ||| || ||||||| | || |||| |||||| |||| || || ||||| || Sbjct 3842632 CCTACAACCTCATGTCCCA-GAAGTGCTTCACCCACGCTTCACCCACGCTGTTCAATGCC 3842574 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 || ||||| ||| || ||||| || ||| | || | | || || || ||| Sbjct 3842573 GGAACACCTCAACCTCAGCTGTCCTCCTGCTTCTTGATAGACATGAAAGAAGACAGCATC 3842514 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | ||||| || | |||||||| |||||| || || ||| || || ||||| Sbjct 3842513 GAGGGCATCTATGACACTCTCAAGACTTGTGCCATGATTTCCAAGACTGCCGGAGGTATT 3842454 Query 111858 GGG----ATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAATG 111912 || |||| ||| || || | |||| || | || |||| ||| || |||| Sbjct 3842453 GGCCTCAATGCCCAT---TGCATTC-GTGCCA-CAGGATCCTATATTGCAGGGACCAATG 3842399 Query 111913 GTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAA 111972 | || ||||| | || || ||||||||||| || ||| || || ||||| || Sbjct 3842398 GCACCTCCAATGGTCTCATCCCCATGCTTCGCGTCTTCAACAATACTGCTCGCTACGTCG 3842339 Query 111973 ACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 |||| | || ||||| ||| || | || |||| || || |||||||||| Sbjct 3842338 ACCAGGGCGGTAACAAGCGTCC--AGGTGCCTTTGCCA-TCTACCTCGAACCATGGCACG 3842282 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC- 112085 | || | | || ||| | | |||| ||||| || | || |||| | | || Sbjct 3842281 CAGACGTTTTCGACTTCTTGAACCTGCGAAAGAACCACGGCAAGGAAGAGGT-CAGAGCA 3842223 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 ||||| | |||| || || |||| ||| || | |||||| | | || ||| ||| Sbjct 3842222 CGCGACTTGTTCTATGCCCTGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGAAC 3842163 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAG 112205 | ||| | ||||| || || | |||| || ||||| | || | | || || Sbjct 3842162 CAAGAGTGGACACTCTTCTGCCCTCATGAGGCCCCTGGTCTAGCTGACGTCTATGGCGAC 3842103 Query 112206 GAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC-GACGGTGCC 112264 || || | | || ||| | |||||| | || | || | | | | |||||| Sbjct 3842102 GACTTCAAGGAACTGTACGAGAGATACGAGAAGGAGGGACGTG-GTCGCCAGACGGTTAA 3842044 Query 112265 AGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATA 112323 || | || | | ||| | ||||| ||| || | || ||||||||||| || || || | Sbjct 3842043 GGCC-CAGAAGCTATGGTATGCTATCCTCGAGGCACAGACCGAGACTGGGACCCCCTACA 3841985 Query 112324 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 112383 |||||||||| |||||||| || |||||| || || ||||| |||||| ||| | Sbjct 3841984 TGCTTTACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAACTTGGGTACCATCCGAA 3841925 Query 112384 GTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 112443 | || |||||||| || || || | |||||||||| || ||| |||||||| | Sbjct 3841924 GCTCAAACCTCTGCACCGAGATTGTCGAATTTACAGCTCCTGACGAGGTCGCTGTGTGCA 3841865 Query 112444 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATC 112479 | || || || |||||||||| | | ||||||| Sbjct 3841864 ATCTGGCCTCCCTCGCTCTCCCTACCTTCGTGGATC 3841829 >seq3 Length=8560927 Score = 140 bits (154), Expect = 4e-28 Identities = 207/287 (72%), Gaps = 10/287 (3%) Strand=Plus/Plus Query 102032 GGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCT 102091 ||||| ||||| ||||| |||| |||| | |||||| ||||||| | || Sbjct 3180513 GGAGATGTACAGCCTTCTCATTGACACGTATGTGAAGGATCCCAAAGAGAAGACATATCT 3180572 Query 102092 CTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTG 102151 |||||| ||||| | ||| | ||||| |||| |||||||| || |||||| || || Sbjct 3180573 CTTTGACGCCATTGACACAATCCCATGCATTCGCAAGAAAGCAGACTGGGCTTTGCGATG 3180632 Query 102152 GTTTG---ATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 | | | ||| | ||||| | |||||| |||| | | || ||||| || || Sbjct 3180633 GATCGCAGATAAAGAGTCGAG---CTTTGCCCAGCGGTTAGTTGCTTTTGCAGCCGTCGA 3180689 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGA-GGTCTC 102266 || |||||||||||||| ||||| ||| || || | ||||||||| ||| | || || Sbjct 3180690 AGGCATCTTCTTCTCTGGATCCTT-TGCAGCGATCTTCTGGCTCAAG-AGCAAGGGCCTG 3180747 Query 102267 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 ||||| || ||| |||||||||||||||||||| ||||| ||||| Sbjct 3180748 ATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTCCCGTGATGAGGG 3180794 >seq6 Length=1908156 Score = 86.0 bits (94), Expect = 8e-12 Identities = 114/157 (73%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 163559 GCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGGGTGTTATTGAT 163618 ||||| ||||| || ||||||| |||||| |||| | || || || || ||||| Sbjct 1747996 GCGCCTCGATCGGGCCTCGCTGCAAAACACTTTATCGACACGGGAGCCGGCGTCATTGAC 1748055 Query 163619 CCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACAAAGACTTTGAG 163678 | ||||||| || || ||||| ||| | |||||||| || | || ||||||||| Sbjct 1748056 GCGGACTACAGAGGGGAGGTCAAGGTCCTGCTCTTCAACCACAGCGAGGTCGACTTTGAG 1748115 Query 163679 GTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTG 163715 || |||| ||| || ||||| || | | ||| ||||| Sbjct 1748116 GTGAAGAAGGGCGACCGCATTGCTC-AGTTGGTCTTG 1748151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741748220480