Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 210 3e-49 >seq4 Length=4919768 Score = 210 bits (232), Expect = 3e-49 Identities = 1138/1786 (64%), Gaps = 60/1786 (3%) Strand=Plus/Plus Query 109398 CGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATG 109457 |||| | | ||| ||||| ||||| || || ||||| || |||||| | | ||| Sbjct 3840966 CGCCATTGTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATG 3841025 Query 109458 CATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTG 109517 ||| || || ||| | ||||| || || | ||| | ||||| ||||| Sbjct 3841026 CATGCTAGTGATCTTGCCCATGGTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTG 3841085 Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCA 109577 ||||||||| ||| || || || ||||| | | || | |||||| |||||||| Sbjct 3841086 ATCGATGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCTGATTTCCCA 3841145 Query 109578 GACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCC 109637 || ||||| || | | ||||| || |||| |||| |||||| || || ||||| Sbjct 3841146 CACGGTCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGAGCC 3841205 Query 109638 ACCAGCCTTCACC-ATGA---GATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGA 109693 |||||| | |||| ||| |||||| | | ||||| || || | | | Sbjct 3841206 ----GCCTTCGGCTATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAACTA 3841261 Query 109694 GATCGT-CAACAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAG 109751 |||| | || ||| ||| ||| || || ||||| || ||||| || || Sbjct 3841262 GATCCTTCAGCAACCATGG--GTTAACGACTTGGAATTCTCCGGCAAGGACACGGCGAGA 3841319 Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 |||||| || | |||||| ||||||||||| || ||||||||||| || || | || || Sbjct 3841320 GTAGATATTTGACGTGTATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGA 3841379 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCTTTACCCGC 109869 || || ||||| || || | || ||| ||| || | || | | | | | | || Sbjct 3841380 GGCAGTAGGCATAGGGGCGACAAGCAGAGAGTTGCGAACGCCATGTTTGGCAATCTCGGC 3841439 Query 109870 TCACGCATTGCGTCCCAATCATA-ACGACCACTAAATTTAGTCTCACCATCCCACATATC 109928 | | | | ||||||||| | | | || | | | | | |||||| || Sbjct 3841440 TTTC--AAGGAGTCCCAATCCCACAGGTCCGAGGGAGTGA-------CGTTCCACATGTC 3841490 Query 109929 TGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAAC 109988 |||||| | |||| | | || |||| | | | || || | |||| | Sbjct 3841491 GTATTGAAGAATGCCCTGTGAGACGGGGCTGCCCTCGTATGTTTCATAGGTTCCCTGCTC 3841550 Query 109989 CTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGC 110048 || ||| | ||| | || || || || ||||| || || || ||||| || ||| Sbjct 3841551 CTTGGCGAGTTCGCAAGAGGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAAT 3841610 Query 110049 ATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCG 110107 ||||| | | | ||| | |||| |||||||||| || || || || |||| | Sbjct 3841611 ATTCAGTTGCCTGGCCTCGGGAGAGTCAAAGGGAAGACG-CAGAGCAAGGAAGGCATCGG 3841669 Query 110108 CTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTT 110167 | ||||| ||||| || ||||| | || ||||| | ||| | | || | || Sbjct 3841670 CGAGACCTTGAACGCCCAGACCGACAGGCCGATGTCGGAAGTT-GCTCTTCTTT--GCTT 3841726 Query 110168 CT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCG 110224 | ||||| || ||||| ||||||| | || || || || || | | Sbjct 3841727 CGGGAACGGGATAGTAGTTGATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAG 3841786 Query 110225 TGATTTCATGGAGTTTGTCGTAATCGAA--CGTTTTCGTCTC----CTTATTGACATATT 110278 | | ||||| || || | | || | | ||| ||| || || || | Sbjct 3841787 TTACCTCATGAAGA----CG--ACCAAAGTCATATTCACCTCGAGCCTGATCCACGAAGG 3841840 Query 110279 TGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCA 110338 | |||||||| | || || ||||||||||||| |||||| | || |||| | Sbjct 3841841 TAGGGAGAGCGAGGGAGGCCAGATTGCACACAGCGACCTCGTCAGGAGCTGTAAATTCGA 3841900 Query 110339 AAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT-CGATTTG 110397 ||| || || || | ||| || || ||| ||||||||||||||| || | ||| Sbjct 3841901 CAATCTCGGTGCAGAGGTTTGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTC 3841960 Query 110398 GAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGA 110457 | ||||| || ||||| || |||||||| ||||| ||||| || ||||||| || ||| Sbjct 3841961 TA-TTGCAGGCGTCCTTGTAAAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGG 3842019 Query 110458 ATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTA 110516 || || | ||||| | || | ||| || || | | | | || |||| |||||| Sbjct 3842020 ATAGCATACCATAGCTTCTG-GGCCTTAACCGTCTGGCGACCACGTCCCTCCTTCTCGTA 3842078 Query 110517 CTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTC 110576 | ||||| |||| || || | || || || |||| ||||| |||| | Sbjct 3842079 TCTCTCGTACAGTTCCTTGAAGTCGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATG 3842138 Query 110577 GGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAAT 110636 || |||||||| | ||| | | || ||| || | | |||||||| ||||||| | Sbjct 3842139 AGGGCAGAAGAGTGTCCACTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGT 3842198 Query 110637 CCACATCGCCGAGAAAAGGTCACG-GCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTA 110695 ||||| || |||| | ||| || || || ||||||| | || ||||| || | Sbjct 3842199 CCACAGGGCATAGAACAAGTCGCGTGCTCTGA-CCTCTTCCTTGCCGTGGTTCTTTCGCA 3842257 Query 110696 GCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCT 110755 | | ||| ||||| | | || | ||||||||||||||| |||| || | || || Sbjct 3842258 GGTTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTG 3842317 Query 110756 TACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAG 110812 ||| ||| |||||| || ||||| || || |||||||| | ||||| | Sbjct 3842318 GACGCTTGTTACCGCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGG 3842377 Query 110813 GAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGT 110872 | || | |||| ||| ||||| || || ||| ||| ||||||||||| Sbjct 3842378 GGATGAGACCATTGGAGGTGCCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGC 3842437 Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGT 110931 ||| || | |||||||| || || ||| ||| |||| | ||| |||| Sbjct 3842438 AATGGGCATTGAGGCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCT-TGAGA 3842496 Query 110932 GTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATC 110991 || |||| || || || || ||| | || || | || | ||||| || |||| | Sbjct 3842497 GTGTCATAGATGCCCTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGC 3842556 Query 110992 TGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA-CAGACCTTG 111050 ||||| |||| ||||| |||||||| || || |||| || || |||| || | || Sbjct 3842557 TGAGGTTGAGGTGTTCCGGCATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTC-TG 3842615 Query 111051 GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGC 111110 |||||| |||||| || || | || || || | || |||||||||| || Sbjct 3842616 GGACATGAGGTTGTAGGTCTCAATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGC 3842675 Query 111111 AACTCGCATGAACATATATTGAGG-CGT--TTCGATTAGCTTTCCA 111153 || ||||||| ||| | ||| || ||| | ||| | |||| ||| Sbjct 3842676 CACACGCATGAGCATGTGTTGGGGACGTTCTGCGACTTGCTTCCCA 3842721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975381575200