Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 2e-12 >seq4 Length=4919768 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 157891 GGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 157950 ||||||||||| || | || || ||||||| | ||||| | || ||||| ||| Sbjct 842694 GGATACTATGGGACAACTACTCCGTCAGTCATCACGAGAAACATCCTGGAGAACCCTGCC 842635 Query 157951 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 158010 |||||||| || || || ||||||||||| || ||||| | |||||| | | Sbjct 842634 TGGTACACCAGCTATACACCGTATCAAGCTGAAATCAGCCAGGGGCGCTTGGAATCCCTT 842575 Query 158011 TTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTA 158070 | || | |||||| | |||| || ||||| || || | ||||| || || ||| | Sbjct 842574 CTGAACTTCCAAACTGTTGTCACTGATCTCACGGGCCTCGCAATAGCTAATGCCTCTGTT 842515 Query 158071 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 | || |||| || || || || ||||||||| Sbjct 842514 CTCGACGAAGGGACGGCTGCCGCTGAAGCAATG 842482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050582546240