Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 2e-21
>seq3
Length=8560927
Score = 116 bits (128), Expect = 2e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || | ||||| ||| |||||||| | ||||| || ||||| ||||| ||||| ||
Sbjct 4894868 CCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 4894927
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || | || |||| ||| || |||||||| || || || || ||||| ||||
Sbjct 4894928 AGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGA 4894987
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || |||||||| |||||| |||||| | |||| || | ||| ||
Sbjct 4894988 ATGCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACC 4895047
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | || || || |||||||| | ||| |||||||||||||||||
Sbjct 4895048 TCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||||||||| || || |||| |||| |||| || || || |||||
Sbjct 4895131 TTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCCAATTGCTTGCCCGCAAA 4895190
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || || ||||| |||| | || |||||||| ||||| ||||||
Sbjct 4895191 GATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTT 4895250
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| |||| || | |||||| |||| || || || || ||||| | || |||||
Sbjct 4895251 GTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTCAC 4895310
Query 34970 AAAGATCTGCAT 34981
|||||||||||
Sbjct 4895311 GAAGATCTGCAT 4895322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633267656352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |