Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-13 >seq3 Length=8560927 Score = 91.5 bits (100), Expect = 2e-13 Identities = 187/278 (67%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062 || || || || || | || |||||||| || | | || | |||||| || | ||| Sbjct 3180773 TCGTTGGAGAAAGTGAGGCCGGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCA 3180714 Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122 || |||||||| ||||| || ||||| || |||||||||||||||| | | || | Sbjct 3180713 AAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAAAG 3180654 Query 19123 CTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGC 19182 || | || |||| |||||| || ||||| || || ||||| | ||||| Sbjct 3180653 CTCGACTCTTTATCTGCGATCCATCGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGG 3180594 Query 19183 ATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCT 19242 ||||| || || | | ||| ||||| | ||| | | ||| || ||||| | || Sbjct 3180593 ATTGTGTCAATGGCGTCAAAGAGATATGTCTTCTCTTTGGGATCCTTCACATACGTGTCA 3180534 Query 19243 ATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280 || | | |||||||| || ||||| || || || || Sbjct 3180533 ATGAGAAGGCTGTACATCTCCGAATGGATGTTCTCCAT 3180496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108209785760