Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 2e-13
>seq3
Length=8560927
Score = 91.5 bits (100), Expect = 2e-13
Identities = 187/278 (67%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062
|| || || || || | || |||||||| || | | || | |||||| || | |||
Sbjct 3180773 TCGTTGGAGAAAGTGAGGCCGGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCA 3180714
Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122
|| |||||||| ||||| || ||||| || |||||||||||||||| | | || |
Sbjct 3180713 AAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAAAG 3180654
Query 19123 CTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGC 19182
|| | || |||| |||||| || ||||| || || ||||| | |||||
Sbjct 3180653 CTCGACTCTTTATCTGCGATCCATCGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGG 3180594
Query 19183 ATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCT 19242
||||| || || | | ||| ||||| | ||| | | ||| || ||||| | ||
Sbjct 3180593 ATTGTGTCAATGGCGTCAAAGAGATATGTCTTCTCTTTGGGATCCTTCACATACGTGTCA 3180534
Query 19243 ATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280
|| | | |||||||| || ||||| || || || ||
Sbjct 3180533 ATGAGAAGGCTGTACATCTCCGAATGGATGTTCTCCAT 3180496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108209785760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |