Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4 242 7e-59 seq3 122 2e-22 >seq4 Length=4919768 Score = 242 bits (268), Expect = 7e-59 Identities = 1109/1726 (64%), Gaps = 82/1726 (5%) Strand=Plus/Plus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATG 212636 || ||| | ||||| |||||||||||||||||||| || ||| | ||| || | Sbjct 3840964 GCCGCCATTGTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAA 3841023 Query 212637 TGCATTGCT-GTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAG 212695 ||||| ||| |||| |||| | || || ||| |||| || || | Sbjct 3841024 TGCAT-GCTAGTGA---TCTTGCCC---ATGGTC-GGT--TCCTT------CAAGTGAAT 3841067 Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGA-TAT 212754 ||| || ||||| ||| || ||||| | | | ||| || ||||| | | || | | Sbjct 3841068 GTTGAGAGACTGGGACTGATCGATGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGT 3841127 Query 212755 CTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGG 212814 | | ||| || |||||||||||||| ||| |||||| ||| | |||| | || Sbjct 3841128 CCGT-TGGCTGATTTCCCACACGGTCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGG 3841186 Query 212815 GGATGTTCTGCACAGACCC-CCTGTG--TATGGTCAGCTGCAGGCGCATGTCCTCGTTCC 212871 |||||||||| | || || ||| | |||| | | | | ||| | ||| || Sbjct 3841187 GGATGTTCTGGATCGAGCCGCCTTCGGCTATGATTCGATTCTT---CATATTATCGGACC 3841243 Query 212872 AGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931 | |||||| | | || ||| | || ||||| || | ||||| || || | Sbjct 3841244 ACAGGCCCAAGTCAACTAGATCCTTCAGCAACCATGGGTTAACGACTTGGAATTCTCCGG 3841303 Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991 || || | | ||| | ||||| ||||| || |||| | |||||||| || | Sbjct 3841304 CAAGGACACGGCGAGAGTAGATATTTGACGTGTATGGTTCGAAACATTCGTTGTTGCCTA 3841363 Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 ||||||| | || ||| || ||||| || || || || ||| ||| | || || | Sbjct 3841364 GAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGACAAGCAGAGAGTTGCGAACGCCAT 3841423 Query 213052 GCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCC 213110 | | | | || ||| ||| | |||| ||||| ||||||| | Sbjct 3841424 GTTTGGCAATCTCGGCTTTCAAGGAGT-CCCAATCCCA---------CAGGTCCGAGGGA 3841473 Query 213111 TTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAG 213170 | |||||||||||||| | || | ||||| | ||||||||||||| ||| | Sbjct 3841474 GTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTGAGACGGGGCTGCCCTCGTATGTT 3841533 Query 213171 GAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATG 213230 |||| || ||||||||||| || ||||| || || || ||||| | ||| ||| Sbjct 3841534 TCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAGTGAGAGCAGCATGGTAAATG 3841593 Query 213231 GTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATG 213290 |||||||| || | | || || | | ||||||| || || ||||| | || Sbjct 3841594 GTTTCAAAGATTTGAATATTCAGTTGCCTGGCCTCGGGAGAGTCAAAGGGAAGACGCAGA 3841653 Query 213291 CGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTA 213350 |||| |||| || || || || || || | |||| || | |||| | ||| Sbjct 3841654 GCAAGGAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACAGGCCGATGTCGGAAGTTG 3841713 Query 213351 GACTTGGAGCACTCCTCC----AAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTT 213406 ||| | | || | | ||| || ||||| |||||||||||||| ||||| Sbjct 3841714 CTCTT----CTTTGCTTCGGGAACGGGATAGTAGTTGATATCGATGATCTTGTTTAGGTT 3841769 Query 213407 GCGGGTGGCCACTTTGGTGAC---ATG-----GGCCAGGTACTCGTGATTGAACACGTAG 213458 ||| ||| |||||| || || ||| | ||| | || | ||| | | || || Sbjct 3841770 GCGAGTGACCACTTGAGTTACCTCATGAAGACGACCAA--AGTCAT-ATTCACCTCG-AG 3841825 Query 213459 CCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCC 213518 || | | ||| || ||| || |||| | |||||| ||||| || || ||||| Sbjct 3841826 CC----TGATCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTGCACACAGCGACCTCG 3841881 Query 213519 TGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | || |||| | || | ||||||||||| ||||| || ||||||||| |||| | Sbjct 3841882 TCAGGAGCTGTAAATTCGACAATCTCGGTGCAGAGGTTTGAGCTTCGGATGGTACCCAAG 3841941 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 |||| ||||| |||| ||| | |||||||| ||||||||||||| ||| ||| Sbjct 3841942 TTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTAGGGGGTCCCAGTC 3842001 Query 213639 TCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACA 213698 || ||| | | | || || ||| || | | |||||| ||| | | | || Sbjct 3842002 TCGGTCTGTGCCTCGAGGATAGCATACCATAGCTTCTGGGCCTTAACCGTCTGGCGACCA 3842061 Query 213699 GCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTG 213758 ||| | | |||||| ||||| || || ||||| |||| ||| |||| Sbjct 3842062 CGTCCCTCCTT---CTCGTATCTCTCGTACAGTTCCTTGAAGTCGTCGCCATAGACGTCA 3842118 Query 213759 TCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTC 213816 | || || || | ||| ||| || | ||| |||| || || | |||| ||| | Sbjct 3842119 GCTAGACCAGGGGCCTCATGAGGG-CAGAAGAGTGTCCACTCTTGGTTCTTCTC-GACAC 3842176 Query 213817 TCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGT 213876 | |||||||| ||| || |||||| || ||||| ||| | | || ||| | Sbjct 3842177 GTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCTCTGACCTCTT 3842236 Query 213877 CCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCA 213936 || || ||| || ||||| | | ||||| || | ||| |||||||| || || | Sbjct 3842237 CCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTTCGA 3842296 Query 213937 TGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC-CAGCCTGGCCACC 213992 ||||||||||||||| || || | |||| ||||||||||| || ||| | || Sbjct 3842297 GGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGTAGC--GAGCAGT 3842354 Query 213993 A-TGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTAT 214051 | ||||||||| ||| || | ||| | || || ||||| || ||||| || || || Sbjct 3842355 ATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTCCCTGCAAT 3842414 Query 214052 ATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTG 214109 ||| || || | ||| | | | || ||| ||| || || || ||||| |||| Sbjct 3842415 ATAGGATCCTGTGGCACGAATGCAATGGGCAT--TGAGGCCAATACCTCCGGCAGTCTTG 3842472 Query 214110 GAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGG 214169 || |||||||| || | | | ||| || |||||| | |||||||| ||| | | | Sbjct 3842473 GAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATGCTGTCTTCTTTCATG 3842532 Query 214170 TTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG--CCAGAGTTGAAAAGCGTGG 214227 | | |||||||||| || ||||| || | || | | || | ||||| ||||||| Sbjct 3842533 TCTATCAAGAAGCAGGAGGACAGCTGAGG--TTGAGGTGTTCCGGCATTGAACAGCGTGG 3842590 Query 214228 GGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273 | || ||| | | |||| | || | ||| |||||||||| Sbjct 3842591 GTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTC 3842636 >seq3 Length=8560927 Score = 122 bits (134), Expect = 2e-22 Identities = 281/418 (67%), Gaps = 13/418 (3%) Strand=Plus/Minus Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 |||||| | || ||||| |||||||||||| ||||||| | |||||||| | Sbjct 3180989 AGCAGGCGGTCGGCGACAAACTCGATGTATTGACACATGAGCTTCGAATTCATGCCCAAC 3180930 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 | || ||||| | || | ||||||||||| || || |||| || ||||| | | Sbjct 3180929 AATGAGACGGGGAGGGCATCGGTGAGAAACTCTTTTTCAATCTTGACAGCTTCGGTGATA 3180870 Query 48074 ATCTGCTTAACGCGGGACTCTGAG---GGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130 || | | | | | | || | ||||||| || || | |||| || | | Sbjct 3180869 ATGTTTTCGATGAGT---TTTGGGTCGGGTTTGTGCTTGAGATGTT--GCATCAAG-AGG 3180816 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || ||||||||| | |||| || || || ||| ||| ||| |||||||||| ||| Sbjct 3180815 CATGCAAAGTCCGTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAGG 3180756 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||| | ||| | ||||||||||| || || || || || |||||||||||| Sbjct 3180755 CCGGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAAG 3180696 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 ||||| || || || || || || | || || | || | | || |||| | Sbjct 3180695 ATGCCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAAAGCTCGACTCTTTATCTGCG 3180636 Query 48311 ATCCA--GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 ||||| | ||| ||||||||||| ||||| |||||||| || || || ||||| Sbjct 3180635 ATCCATCGCAAA--GCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGC 3180580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531821890560