Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 1e-23
seq3 102 2e-16
>seq4
Length=4919768
Score = 125 bits (138), Expect = 1e-23
Identities = 694/1097 (63%), Gaps = 29/1097 (3%)
Strand=Plus/Plus
Query 221406 CGCAAGACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT 221465
||||||| || || ||||| ||||| ||||| |||||||| | || ||| |
Sbjct 3841562 CGCAAGAGGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCC 3841621
Query 221466 TGGCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTA 221525
||||||||||||| ||||| | |||||| | ||| | ||||| || || || |
Sbjct 3841622 TGGCCTCGGGAGAGTCAAAGGGAAGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAA 3841681
Query 221526 CTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAA 221585
| || | ||||| |||| |||| |||| ||||| || ||||||||
Sbjct 3841682 CGCCCAGACCGACAGGCCGATGTCGGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGT 3841741
Query 221586 AGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCT 221645
|||||| ||||| | ||||| ||||| |||||| |||| | ||||| ||
Sbjct 3841742 AGTTGATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGAC 3841801
Query 221646 TCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGG 221705
|| || | | || || | | || ||||| || | || |
Sbjct 3841802 ------GACCAAAGTCATATTCACCTCGAGCCTGA------TCCACGAAGGTAGGGAGAG 3841849
Query 221706 CAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTG 221765
| | | |||||| || ||||| || |||||||| ||| | | | ||||| |
Sbjct 3841850 CGAGGGAGGCCAGATTGCACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGG 3841909
Query 221766 TACAGAGGTTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGC 221823
| |||||||| || ||| |||||| |||| || || || || ||| | ||||
Sbjct 3841910 TGCAGAGGTT--TGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCA 3841967
Query 221824 AGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC 221883
||||||||||| ||||| |||| |||||||| ||| ||| | || || |
Sbjct 3841968 GGCGTCCTTGTAAAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATA 3842027
Query 221884 CCAGAGTTCTCTGGCGCTCA-CCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCG 221941
||| || | ||||| || | ||||| | ||| | ||||| ||| | || |
Sbjct 3842028 CCATAGCT-TCTGGGCCTTAACCGTC-TGGCGACCACGTCCCTCCTTCTCGT-ATCTCTC 3842084
Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACAC-CTGGCGGG 222000
||| || | | || | || || || | || | || || || | | | |||
Sbjct 3842085 GTACAGTTCCTTG--AAGTCGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGG 3842142
Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060
|| | || |||| | | ||| | | ||| | | |||||| | ||| || ||||
Sbjct 3842143 -CAGAAGAGTGTCCACTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCA 3842201
Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGA 222118
||| || | || | || | || | ||| ||| ||| ||||| ||| || | |||
Sbjct 3842202 CAGGGCATAGAACAAGTCGC--GTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGG 3842259
Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178
| ||| || || |||| ||| |||||||| || || || |||| ||| | || || ||
Sbjct 3842260 TTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGA 3842319
Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGT 222238
|||||||| || ||||| || || | | | |||||||| |||||| | ||
Sbjct 3842320 CGCTTGTTACCGCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGG 3842379
Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298
| || || ||||| || ||||| || ||| || | || ||| | | | |
Sbjct 3842380 ATGAGACCATTGGAGGTGCCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAA 3842439
Query 222299 CTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358
|||| | ||| ||||| ||||| || || |||||||| || |||||||||||
Sbjct 3842440 TGGGCATTGAGGCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTG 3842499
Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA 222418
|| ||||||||| || ||| || || | || | || || || || |||| ||||
Sbjct 3842500 TCATAGATGCCCTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGA 3842559
Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478
| || | | | ||| || ||||||||||| ||||| || ||| | | |||
Sbjct 3842560 GGTTGAGGTGTTCCGGCATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGAC 3842619
Query 222479 ATCAGATCGTACGTCTC 222495
|| || | ||| |||||
Sbjct 3842620 ATGAGGTTGTAGGTCTC 3842636
>seq3
Length=8560927
Score = 102 bits (112), Expect = 2e-16
Identities = 123/165 (75%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929
|||| | ||||| | || || ||||| || || || |||||||| ||| || || |||
Sbjct 3180655 TTTGCCCAGCGGTTAGTTGCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTT 3180714
Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGA 25988
|| || ||||||||||||||| ||||| |||||||| || ||||| ||||||||
Sbjct 3180715 GCAGCGATCTTCTGGCTCAAGAGCAAGGGCCTGATGCCCGGCCT-CACTTTCTCCAACGA 3180773
Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033
||| ||| | | || |||||| | || | || ||||| |||||
Sbjct 3180774 GCTTATCTCCCGTGATGAGGGTATGCATACGGACTTTGCATGCCT 3180818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843824712960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |