Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 1e-11 >seq4 Length=4919768 Score = 84.2 bits (92), Expect = 1e-11 Identities = 277/427 (65%), Gaps = 4/427 (1%) Strand=Plus/Plus Query 25931 TCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCT 25990 ||||| || || || ||| |||||| ||||| || || || | ||||| | ||||| Sbjct 3842179 TCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCTCTGACCTCTTCC 3842238 Query 25991 TTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAA 26050 || ||||| |||||| || | ||||| || |||| |||| |||||||||||| | Sbjct 3842239 TTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTTCGAGG 3842298 Query 26051 TAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCA 26110 ||||| ||||| |||| | || || || || || ||||| | ||||| | Sbjct 3842299 TAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGTAGCGAGCAGTATTG 3842358 Query 26111 TTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTG 26170 ||||| || | ||| || | | ||| | || || || || | ||| | | Sbjct 3842359 TTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTCCCTGCAATATAG 3842418 Query 26171 GATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATA 26230 |||||||| | | ||| || |||| | || || || || || || ||||| Sbjct 3842419 GATCCTGTGGCACGAATGCAATGGGCATTGAGGCCAATACCTCCGGCAGTCTTGGAAATC 3842478 Query 26231 GCTGCACAA-TC-TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288 |||||| || ||| | || || | || || | ||||| || ||||||| ||| Sbjct 3842479 ATGGCACAAGTCTTGAGA--GTGTCATAGATGCCCTCGATGCTGTCTTCTTTCATGTCTA 3842536 Query 26289 ATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAG 26348 || || || || || | || | |||| |||||| | ||| || | || |||| || Sbjct 3842537 TCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAACAGCGTGGGTGAAG 3842596 Query 26349 CATGAGT 26355 | || || Sbjct 3842597 CGTGGGT 3842603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039740950300