Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq4 84.2 1e-11
>seq4
Length=4919768
Score = 84.2 bits (92), Expect = 1e-11
Identities = 277/427 (65%), Gaps = 4/427 (1%)
Strand=Plus/Plus
Query 25931 TCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCT 25990
||||| || || || ||| |||||| ||||| || || || | ||||| | |||||
Sbjct 3842179 TCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCTCTGACCTCTTCC 3842238
Query 25991 TTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAA 26050
|| ||||| |||||| || | ||||| || |||| |||| |||||||||||| |
Sbjct 3842239 TTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTTCGAGG 3842298
Query 26051 TAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCA 26110
||||| ||||| |||| | || || || || || ||||| | ||||| |
Sbjct 3842299 TAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGTAGCGAGCAGTATTG 3842358
Query 26111 TTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTG 26170
||||| || | ||| || | | ||| | || || || || | ||| | |
Sbjct 3842359 TTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTCCCTGCAATATAG 3842418
Query 26171 GATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATA 26230
|||||||| | | ||| || |||| | || || || || || || |||||
Sbjct 3842419 GATCCTGTGGCACGAATGCAATGGGCATTGAGGCCAATACCTCCGGCAGTCTTGGAAATC 3842478
Query 26231 GCTGCACAA-TC-TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288
|||||| || ||| | || || | || || | ||||| || ||||||| |||
Sbjct 3842479 ATGGCACAAGTCTTGAGA--GTGTCATAGATGCCCTCGATGCTGTCTTCTTTCATGTCTA 3842536
Query 26289 ATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAG 26348
|| || || || || | || | |||| |||||| | ||| || | || |||| ||
Sbjct 3842537 TCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAACAGCGTGGGTGAAG 3842596
Query 26349 CATGAGT 26355
| || ||
Sbjct 3842597 CGTGGGT 3842603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039740950300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |