Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 9e-11 >seq4 Length=4919768 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| || || || || || |||| || | | ||| || || ||||||| | || Sbjct 842482 CATTGCTTCAGCGGCAGCCGTCCCTTCGTCGAGAACAGAGGCATTAGCTATTGCGAGGCC 842541 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || |||| | |||||| | || | | | |||||| | ||||| || Sbjct 842542 CGTGAGATCAGTGACAACAGTTTGGAAGTTCAGAAGGGATTCCAAGCGCCCCTGGCTGAT 842601 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 ||||||||||| || || || |||||||| ||| ||||| || | ||||| | Sbjct 842602 TTCAGCTTGATACGGTGTATAGCTGGTGTACCAGGCAGGGTTCTCCAGGATGTTTCTCGT 842661 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCC 140071 ||||||| || ||| | || ||||||||||| Sbjct 842662 GATGACTGACGGAGTAGTTGTCCCATAGTATCC 842694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997792051680