Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4 129 2e-24
seq17 113 1e-19
>seq4
Length=4919768
Score = 129 bits (142), Expect = 2e-24
Identities = 377/571 (66%), Gaps = 21/571 (4%)
Strand=Plus/Plus
Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTC-GTCGCTGTA--TTCTACAATCTCACAG 155648
|| |||||||| || || || ||| ||| | |||||| ||| |||||||| |
Sbjct 3841855 GAGGCCAGATTGCACACAGCGACCTC---GTCAGGAGCTGTAAATTCGACAATCTCGGTG 3841911
Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708
|| ||||| || || |||||| || || ||||||||||| || || || || ||
Sbjct 3841912 CAGAGGTTTGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCG 3841971
Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAG 155768
|||||||| || ||||| ||||| || ||||| ||||||| || || || |||
Sbjct 3841972 TCCTTGTAAAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCAT 3842031
Query 155769 AGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGC 155828
|| | |||| |||| || | | || ||| ||| ||| || |||||
Sbjct 3842032 AGCTTCTGGGCCTTAACCGTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAG- 3842090
Query 155829 GTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886
||| | | || || || || ||| || |||||| || || ||||| || |
Sbjct 3842091 -TTCCTTGAAGTCGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGA 3842149
Query 155887 GCGACCAAATTT---TATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAG 155943
| | ||| || | || ||| |||| ||||| || | ||| | ||| | |
Sbjct 3842150 GTGTCCACTCTTGGTTCTTCTCGA---CACGTTCCATGAACAAGTCAGGAGTCCACAGGG 3842206
Query 155944 CATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
||||||| | ||| | ||| | |||| || || | |||||| ||||| || || | |||
Sbjct 3842207 CATAGAACAAGTCGCGTGC-TCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAG 3842265
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG 156062
|| || || || | || ||| || || || || ||||| ||| | ||||
Sbjct 3842266 AAGTCGAAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTG 3842325
Query 156063 ---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| ||||| || || || |||||||| || |||||||| | ||||| || || | |
Sbjct 3842326 TTACCGCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGA 3842385
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATAT 156150
|||||||| ||||||||||| || |||||
Sbjct 3842386 CCATTGGAGGTGCCATTGGTCCCTGCAATAT 3842416
>seq17
Length=207847
Score = 113 bits (124), Expect = 1e-19
Identities = 195/279 (70%), Gaps = 6/279 (2%)
Strand=Plus/Plus
Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490
|| |||| | ||| |||||| ||||| | || || | ||| ||| ||| ||||||
Sbjct 139324 TGCACGCGGAAAGGATCAGAAACGTCAAAAAGGCGTTCTTTGAGGAATGAAGAGGCACCG 139383
Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550
|||| ||||| || || || ||||||||||||||||| |||||||| |||||||| | |
Sbjct 139384 TGTGCGATCATGCAGTCGCGTTCCATTTCACCGAAACGGAGACCACCGTCGCGAGCACGA 139443
Query 251551 CCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTA 251610
|| ||| | ||||| || || || | | || || | |||| || ||
Sbjct 139444 CCTTCGACGGGCTGTCGGGTCAGGATTTGGGTTGGTCCTCGAGCGCGGGAGTGGATTTTG 139503
Query 251611 TCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TGCTCGAAG 251668
|||| |||||||| | |||||||||||| | | || |||| ||||| || ||| |
Sbjct 139504 TCATCGACCATATGTCTTAGACGCTGGTAGTAGGTAGGGCCGAGGAAGACTTGTGCGACG 139563
Query 251669 -GCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCG 251706
|| |||| | ||||| | | || ||||| ||||||
Sbjct 139564 AGC--TTGCGC-CCAGTATGCCCATTGTACATGACTTCG 139599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816015956308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |