Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq9 138 1e-26
seq4 132 6e-25
seq3 89.7 6e-12
>seq9
Length=3042725
Score = 138 bits (152), Expect = 1e-26
Identities = 106/126 (84%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|| |||||| | ||||| || ||||||||||| ||||||||| |||| || ||| | |||
Sbjct 2818180 CTTTTTGAGATCATCCTGGCTGCCAACTACCTTGACATCAAGGCTCTACTTGATGTCGGG 2818239
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
|| ||| | || ||||||||||||||||||||||| || || |||||||||||||||||
Sbjct 2818240 TGTAAGACCGTCGCCAACATGATCAAGGGCAAGTCTCCAGAAGAGATCCGCAAGACCTTC 2818299
Query 1592288 AACATC 1592293
|| |||
Sbjct 2818300 AATATC 2818305
>seq4
Length=4919768
Score = 132 bits (146), Expect = 6e-25
Identities = 211/303 (70%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| ||||||||||||||| || || | ||| |||||||| |||||||| | ||| || ||
Sbjct 3842331 GCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATT 3842390
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181
||| ||| ||||| || || | |||| || | ||| || | || || |
Sbjct 3842391 GGAGGTGCCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTGAG 3842450
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
||| || || ||||| | |||||| || | || || ||||| ||||| ||||||||
Sbjct 3842451 GCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCC 3842510
Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301
|||||| ||| | |||||||| | | ||||| || || || || || | ||
Sbjct 3842511 CTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGT 3842570
Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361
||||| ||||| |||||||| | || |||||| ||| | | |||||| || |||
Sbjct 3842571 TCCGGCATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTA 3842630
Query 1630362 GGT 1630364
|||
Sbjct 3842631 GGT 3842633
Score = 91.5 bits (100), Expect = 2e-12
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507
||| || | |||| |||||||| || || || | |||||| || | | ||| |||||
Sbjct 3842181 CATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCTCTGACCTCTTCCTT 3842240
Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567
||||||||||||| |||| | |||||| || ||| |||||||| || || |||||
Sbjct 3842241 GCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTTCGAGGTA 3842300
Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
| ||||||||| || |||||| |||||
Sbjct 3842301 GATGGCAAAGGCACCTGGACGCTTGTTACCGCC 3842333
>seq3
Length=8560927
Score = 89.7 bits (98), Expect = 6e-12
Identities = 193/284 (68%), Gaps = 11/284 (4%)
Strand=Plus/Minus
Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231
||||| ||| || || || ||| | |||||| || | |||||||||||| ||||
Sbjct 3180802 TATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAGGCCGGGCATCAGGC 3180743
Query 869232 CGCGCTTCTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACG 869290
| |||||||||| ||||| || ||| || || ||||| |||||||| ||||||
Sbjct 3180742 CCTTGCTCTTGAGCCAGAAGATCGCTGCA-AAGGATCCAGAGAAGAAGATGCCTTCGACG 3180684
Query 869291 GCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCAC 869347
|| ||||| | | | ||||| ||||||| |||| ||| || | ||||||
Sbjct 3180683 GCTGCAAAAGCAACTAACCGCTGGGCAAAG--CTCGA----CTCTTTATCTGCGATCCAT 3180630
Query 869348 TTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGG 869407
|| |||||||| || || || | | | || | ||||| |||||| ||||||
Sbjct 3180629 CGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGTCAAAGAGA 3180570
Query 869408 TGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451
| ||| || || ||||| ||||| ||||| || || ||
Sbjct 3180569 TATGTCTTCTCTTTGGGATCCTTCACATACGTGTCAATGAGAAG 3180526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107132306566628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |