Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 4e-26
seq4 116 3e-21
>seq3
Length=8560927
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| | || || || || || ||||||||||| || | ||
Sbjct 4895322 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACGATCACGCTCGAAGTTGAGTCGTCC 4895263
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || || |||
Sbjct 4895262 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCAA 4895203
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || || |||||||| ||| | || || ||||||
Sbjct 4895202 CAGCGCCTGATCTTTGCGGGCAAGCAATTGGAGGATGGCCGAACTCTCTCCGACTATAAC 4895143
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||||||||| || ||| ||||| | |||| ||||| |||
Sbjct 4895142 ATCCAGAAGGAATCGACGCTCCACCTGGTGCTCAGATTACGCGGCGGC 4895095
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| | || || || || |||||||| || || || | |
Sbjct 4895094 ATGCAGATCTTTGTGAAAACTTTGACGGGAAAGACGATTACGCTGGAGGTGGAGAGCTCG 4895035
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| ||||| || || || || |||
Sbjct 4895034 GACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGCATTCCGCCGGACCAA 4894975
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||||| || ||| |||| || | | |||| || || |||
Sbjct 4894974 CAGCGCCTGATCTTTGCCGGCAAGCAGTTGGAAGACGGCCGGACGCTGTCTGACTACAAC 4894915
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || ||||||||||| ||||| ||||| || |||
Sbjct 4894914 ATCCAGAAGGAGAGCACTCTACACTTGGTCTTGCGGTTGCGTGGCGGC 4894867
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | ||||| | || || || || || || || || || || ||
Sbjct 4895553 ACCATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCC 4895494
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| |||||| | || | || || |||||||| |||||||| || || ||||||||
Sbjct 4895493 AGCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGAC 4895434
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || || | || || ||||| |||||||| |||||| | | || || ||
Sbjct 4895433 CAGCAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGCGACTAC 4895374
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||| || ||||| ||||| || ||| |||| | || | ||||| |||
Sbjct 4895373 AACATCCAGAAGGAGTCGACGCTGCACCTGGTCCTCCGTCTCCGCGGTGGC 4895323
>seq4
Length=4919768
Score = 116 bits (128), Expect = 3e-21
Identities = 736/1152 (64%), Gaps = 54/1152 (5%)
Strand=Plus/Plus
Query 138879 GAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGC 138938
||| || ||||| || ||||| ||||||| |||||||| ||||| || | | ||| | |
Sbjct 3841659 GAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACAGGCCGATGTCGGA-AGTTG-CTC 3841716
Query 138939 TTTTGCGGCTTCGATA---GGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCAC 138995
|| | | ||||| | ||||| ||||| | ||||||||| ||||||| || ||
Sbjct 3841717 TTCTTTG-CTTCGGGAACGGGATAGTAGTTGATATCGATGATCTTGTTTAGGTTGCGAGT 3841775
Query 138996 GACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGAC 139055
|||||| | ||| | | | || |||| || ||| || |||
Sbjct 3841776 GACCACTTGAGTTACCTCATGAAGACGACCAAAGTCATATTCACC-------TCGAGCCT 3841828
Query 139056 GACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGG 139115
|| || || || | || | | ||||| | |||||||| || || ||||| ||
Sbjct 3841829 GA--TCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTGCACACAGCGACCTCGTCAGG 3841886
Query 139116 GTCGCTGTA--TTCGACAATTTCGGCACACAAATTACTACACTT--GATCGTACCTAAAT 139171
|||||| ||||||||| |||| || | || | ||| ||| ||||| || |
Sbjct 3841887 A--GCTGTAAATTCGACAATCTCGGTGCAGAGGTT--TGAGCTTCGGATGGTACCCAAGT 3841942
Query 139172 TTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTT 139231
| | || ||||| |||| || || || || ||||||||||| || || || ||||| |
Sbjct 3841943 TCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTAGGGGGTCCCAGTCT 3842002
Query 139232 CCACTTGTGTCTCTATAAT-GAATTTGAACA-AGTCCCTAGCTTGTA----TTTGACGCA 139285
| |||| ||| | || | || | || || || | || | || ||
Sbjct 3842003 CGGTCTGTGCCTCGAGGATAGCAT---ACCATAGCTTCTGGGCCTTAACCGTCTGGCGAC 3842059
Query 139286 CGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCG 139344
| | || | || |||||| | ||||| ||||| | ||| |||| | || ||| ||
Sbjct 3842060 C---ACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTTGAAGTCGT-CGCCATAGACG 3842115
Query 139345 TCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACG 139404
|||| ||| | | || | ||| || | ||| | ||| | |||| || |||
Sbjct 3842116 TCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTTGGTTCTTCTCGACA 3842175
Query 139405 CGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTA--T 139462
|| |||||||| || ||| |||||| || | | ||| ||||| || ||| | |
Sbjct 3842176 CGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGC--TCTGACCT 3842233
Query 139463 CTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTT 139522
||||| || ||| | || ||| | ||| || |||||||| |||||||||||||
Sbjct 3842234 CTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTT 3842293
Query 139523 CCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAG 139579
| || |||||||| | || ||| || ||| || || || ||||||| || |||
Sbjct 3842294 CGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGTAGCGAGCAG 3842353
Query 139580 CATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT-GCTAC-G 139637
||| ||||| ||||| | ||| || ||||| | | || || ||||| || |
Sbjct 3842354 TATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTCCCTGCAA 3842413
Query 139638 GATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTT 139697
|| ||| | || | || || | | ||| |||||| ||| || || ||| || ||
Sbjct 3842414 TATAGGA-TCCTGTG-GCACGAATGCAATGGGCATTGAGGCCAATACCTCCGGCAGTCTT 3842471
Query 139698 GGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCA 139756
||| || | | ||| || | | || || || || || |||||||| || | ||
Sbjct 3842472 GGAAATCATGGCACAAGTCTTG-AGAGTGTCATAGATGCCCTCGATGCTGTCTTCTTTCA 3842530
Query 139757 TCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAG 139816
| | || ||||| || || || || ||| | || ||||| ||||| || |
Sbjct 3842531 TGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAACAGCGTGG 3842590
Query 139817 GACTCGCGTGCGTGAA-CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACA 139875
| ||||| ||||| || || | ||||| | | ||| || || || || | ||
Sbjct 3842591 GTGAAGCGTGGGTGAAGCACTT-CTGGGACATGAGGTTGTAGGTCTCAATAGCCTTTTCA 3842649
Query 139876 ATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCC 139935
| || || || ||||| || | || ||||| ||||| |||||| ||||| ||
Sbjct 3842650 ACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGACGTTCTGCG 3842709
Query 139936 AC-CGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCT 139994
|| || || | || || || || |||| | |||||| ||||||| ||
Sbjct 3842710 ACTTGCTTCC-CAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAAGCCAAAATATTG 3842768
Query 139995 ATAGTTGAAATC 140006
||||||||| ||
Sbjct 3842769 ATAGTTGAAGTC 3842780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897127607520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |