Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 1e-12 >seq3 Length=8560927 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| || ||||| || || || || ||||| || || | || || Sbjct 4895335 ACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCC 4895394 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| |||||||| || | || | | ||||| || || ||||| |||||||| Sbjct 4895395 ATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTT 4895454 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||| || || |||||||| || Sbjct 4895455 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGAT 4895514 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| |||||||| || || |||||||| Sbjct 4895515 GGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218805631844