Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4 181 1e-40 seq3 147 2e-30 seq7 114 1e-20 seq9 84.2 2e-11 >seq4 Length=4919768 Score = 181 bits (200), Expect = 1e-40 Identities = 1172/1852 (63%), Gaps = 61/1852 (3%) Strand=Plus/Plus Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCAT---GCGTAGT-CGTGC-A 148005 |||||||||||||||||||| |||||||| ||||| |||| ||| | | | ||| | Sbjct 3840973 GTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGCTA 3841032 Query 148006 CCGACGACATGAGCGTGTACGTCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGGT 148065 || | || | || ||||| | | || | || | |||||| ||| | Sbjct 3841033 GTGAT--CTTGCCCATG---GTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGAT 3841087 Query 148066 CAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GTCGCTTTATCTTCATCTCCCA 148123 | ||||| || || ||||| || ||||||| | || ||| | || || || ||||| Sbjct 3841088 CGATGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGTC-CGTTGGCTG-ATTTCCCA 3841145 Query 148124 GGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCC 148183 | ||||| || || ||||| | |||| ||| | |||| ||| | |||||| Sbjct 3841146 CACGGTCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGAGCC 3841205 Query 148184 GCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTC 148243 || | || | || |||| ||| | || | | ||| | || | || || Sbjct 3841206 GCCTTCGGCTATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAACTAGATC 3841265 Query 148244 ATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA-TACA 148302 | | || | | || || || || || || ||||| || || || || ||| || | Sbjct 3841266 CTTCAGCAACCATGGGTTAACGACTTGGAATTCTCCGGCAAGGACACGGCG-AGAGTAGA 3841324 Query 148303 CGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCG 148362 || ||| | ||||| || | ||||||||||| | |||||| | ||||| || | Sbjct 3841325 TATTTGACGTGTATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAG 3841384 Query 148363 TGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT---ATTTTGCGCT 148419 | ||||| || || ||||| |||||||| | ||| || ||| || | | | Sbjct 3841385 TAGGCATAGGGGCGACAAGCAGAGAGTTGCGAA---CGCCATGTTTGGCAATCTCGGCTT 3841441 Query 148420 TCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAA 148479 ||| | |||| ||||| || ||| || || ||||||||||||||||| || |||| Sbjct 3841442 TCAAGGAGTCCCAATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAA 3841501 Query 148480 TGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGT 148538 |||| | | || |||||||||||||||| | || | ||| ||| || || ||| Sbjct 3841502 TGCC-CTGTGAGACGGGGCTGCCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGT 3841560 Query 148539 TCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGC 148598 ||||| || ||| || | | |||||| || || ||||| | || || || Sbjct 3841561 TCGCAAGAGGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGC 3841620 Query 148599 GCCGCCGACTCG---CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCC 148655 | | | |||| || | || | |||||| | || || ||||| || || Sbjct 3841621 -CTG--GCCTCGGGAGAGTCAAAGGGAAGACGCAGAGCAAGGAAGGCATCGGCGAGACCT 3841677 Query 148656 TGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GG 148714 || ||||||| || | ||||| ||| | |||| || || || | || Sbjct 3841678 TGAACGCCCAGACCGACAGGCCGATGTCGGAAGTTGCTCTTCTTTGC-TTCGGGAACGGG 3841736 Query 148715 ATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCG 148774 ||||| |||| ||||||||||||| || ||||| ||||| | || | | Sbjct 3841737 ATAGTAGTTGATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATG 3841796 Query 148775 CAGCAATTCAAAATCGTA-----CTTG----TCATCTACGATGCATCGGTTCACGGCGAT 148825 || |||| || || || | | ||| |||| | | || | |||| Sbjct 3841797 AAGACGACCAAAGTCATATTCACCTCGAGCCTGATCCACGAAG-GTAGG--GAGAGCGAG 3841853 Query 148826 AGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCA 148885 ||||| ||||||||||| || ||| || || || | | || || ||||||| ||| Sbjct 3841854 GGAGGCCAGATTGCACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGTGCA 3841913 Query 148886 CAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTC 148945 || || || | ||| |||| |||||| || |||||||| || ||||| ||||| Sbjct 3841914 GAGGTTTGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTC 3841973 Query 148946 CTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCA--CTATGAACCGATGC 149003 |||||| |||||||| || ||||| || ||| | || | || | | || Sbjct 3841974 CTTGTAAAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCAT-- 3842031 Query 149004 AGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGC 149063 || | ||| || || ||| || ||||||| ||||||| ||||| Sbjct 3842032 AGCTTCTGGGCCTTAACCGTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGT 3842091 Query 149064 CGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGC 149123 || ||| | ||||| ||| || | ||||| ||| || || ||||| | ||| Sbjct 3842092 TCCTTGAAGTCGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGT 3842151 Query 149124 GACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTAC 149183 | |||| | || | | || || | ||| |||| || || ||| || || || Sbjct 3842152 GTCCACTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAG 3842211 Query 149184 ATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTG 149243 | | |||||| || || ||||| ||| ||| |||||||| | | | | Sbjct 3842212 AACAAGTCGCGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCG 3842271 Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCG 149300 || | ||| |||||||| || || | ||| | || | || || |||||| ||| Sbjct 3842272 AAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCG 3842331 Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360 ||||||||||||| ||| | | ||||| || || |||| ||| || | ||| || Sbjct 3842332 CCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTG 3842391 Query 149361 GCAGTGCCGTTAGT-AGAGCTA-ATGCGA--CTGCCGCGCGCTCGCACTTTGTGCACGTT 149416 | ||||| || || || | || || ||| || || ||| || ||| || Sbjct 3842392 GAGGTGCCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCA--ATGGGCA--TT 3842447 Query 149417 GACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGA 149475 || ||| || || ||| | ||| || || || | |||| ||| || |||| Sbjct 3842448 GAGGCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTC-TTGAGAGTGTCATAGA 3842506 Query 149476 TGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAAC 149535 |||||||||||||||| |||||| | || ||||| ||| ||| || || | Sbjct 3842507 TGCCCTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAG 3842566 Query 149536 GCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCT 149595 | || ||||| ||||| ||||| ||||| || || | |||||| ||| | | Sbjct 3842567 GTGTTCCGGCATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGT 3842626 Query 149596 CGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCA 149655 ||| | ||| | | || | ||| |||||||| || || | || || ||||| | Sbjct 3842627 TGTAGGTCTCAATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGA 3842686 Query 149656 GCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTA 149715 |||| || || || || || || |||| || ||||| ||||| | ||| | || | Sbjct 3842687 GCATGTGTTGGGGACGTTCTGCGACTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCA 3842746 Query 149716 GTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 |||||| ||||||| || | |||| ||||| ||| ||| | |||| || Sbjct 3842747 ACGTCTTGAAGCCAAAATATTGATAGTTGAAGTCTCGGTCGTAGACAATTGC 3842798 >seq3 Length=8560927 Score = 147 bits (162), Expect = 2e-30 Identities = 154/200 (77%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || ||| | | | ||||||||||| ||||| Sbjct 4895354 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCA-TCCTCGAGCTGTTTGCC 4895412 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||||||||||||||| ||||| || ||||| |||||| ||| Sbjct 4895413 GGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGGATCTTGGACTT 4895472 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| ||| ||| || || | |||| ||| ||||| |||| || Sbjct 4895473 GACGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTCAAGGT 4895532 Query 133643 TTTTACGAAAATCTGCATGG 133662 ||| ||||| |||||||||| Sbjct 4895533 TTTCACGAAGATCTGCATGG 4895552 Score = 125 bits (138), Expect = 7e-24 Identities = 276/406 (68%), Gaps = 11/406 (3%) Strand=Plus/Minus Query 120465 GAGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAG 120524 |||||| ||||| || |||||||| ||||| | |||||| || || |||||||||| Sbjct 3180990 GAGCAGGCGGTCGGCGACAAACTCGATGTATTGACACATGAGCTTCGAATTCATGCCCAA 3180931 Query 120525 CAACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAA 120584 ||| | || || | || |||| |||||| || ||||| | || || || ||| Sbjct 3180930 CAATGAGACGGGGAGGGCATCGGTGAGAAACTCTTTTTCAATCTTGACAGCTTCGGTGAT 3180871 Query 120585 CATGGCGAGCAT-AGTGT--GGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAG 120641 ||| || ||| | || |||| ||||| | || | | | | | || Sbjct 3180870 AATGTTTTCGATGAGTTTTGGGTCGGGT---TTGTGCTTGAGATGT-TGCATCA--AGAG 3180817 Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 ||| ||||||||||| |||| ||||| || || || || ||||||||| || || || Sbjct 3180816 GCATGCAAAGTCCGTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAG 3180757 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 ||||||||| | ||| || |||||| |||| || || |||||| || || ||||| Sbjct 3180756 GCCGGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAA 3180697 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGT- 120820 | ||| || ||| ||||| || || | |||| ||| || ||| | |||| | | Sbjct 3180696 GATGCCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAAAGCTCGAC-TCTTTATCTG 3180638 Query 120821 CGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 ||||||| || ||||| || || || ||||| | ||| || || Sbjct 3180637 CGATCCATCGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGGAT 3180592 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| | ||||||||||| | || || ||||| ||||| || ||||||||||||||| Sbjct 4895168 TCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTG 4895227 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | |||||||| | ||| || |||| |||| Sbjct 4895228 TCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATC 4895287 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || |||| ||||| ||||| ||||||||| Sbjct 4895288 GTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCATG 4895323 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512 || |||| ||| ||| ||||| || ||||| || || ||| || || || || | Sbjct 4894889 AAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCG--TCTTCCA 4894946 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||||||| || | || || ||||| ||||| || || |||||||||||||| | Sbjct 4894947 ACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGAATGCCTTCCTTGTCCTGAA 4895006 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||||| | || | |||||| | | |||||| || | || | || || | Sbjct 4895007 TCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTAATCGTCTTTC 4895066 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661 | |||| |||||| || || ||||||||| Sbjct 4895067 CCGTCAAAGTTTTCACAAAGATCTGCATG 4895095 >seq7 Length=2048283 Score = 114 bits (126), Expect = 1e-20 Identities = 135/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCGTAAA 133530 ||||| || ||||| |||| || || ||| ||| || ||||||||||| ||| | | Sbjct 22034 TTCTGGATGTTGTAGTCGCTCAGAGT--ACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGA 21977 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | | ||||||||||| || ||||||||||||||||| |||||| ||||| | | Sbjct 21976 TCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 21917 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | |||||||| | ||| || |||| ||||| ||| ||||| || || || || |||| Sbjct 21916 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 21857 Query 133651 A 133651 | Sbjct 21856 A 21856 >seq9 Length=3042725 Score = 84.2 bits (92), Expect = 2e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| |||||||| ||| | ||| ||| ||| || || |||||||| Sbjct 1318733 GTGGATTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACC-GTCTTCAAGTTGCTTGCC 1318791 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||| | || || ||||||||||| ||||| |||||||||||||| Sbjct 1318792 AGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCTTCCTTGTC 1318836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420292408160