Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 >seq3 Length=8560927 Score = 123 bits (136), Expect = 2e-23 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | ||| || || ||||| |||||||||||||| || || |||||||| || || Sbjct 4894868 CCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 4894927 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| ||||| || || |||||||| |||| ||||| || || |||| Sbjct 4894928 AGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGA 4894987 Query 33643 ACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCC 33699 | ||||| ||||| ||| || || || || | ||| | ||||| | | | ||| Sbjct 4894988 ATGCCTTCCTTGTCCTGAATCTTGCTCTT--GACGTTGTCGATCGTGTC-CGAGCTCTCC 4895044 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||| ||||| || || || || ||||| |||||||||||||| Sbjct 4895045 ACCTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || ||||| || |||||||| || || | || |||||||| || || ||||| Sbjct 4895132 TCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCCAATTGCTTGCCCGCAAAG 4895191 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT-CTGTTTCAACAT 33677 |||| ||||| || || |||| | ||||| ||||| || || || || || | Sbjct 4895192 ATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGCTCTTG--ACGT 4895249 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||||| || || || || | ||||||||| || || || || ||||| | Sbjct 4895250 TGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTCA 4895309 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 4895310 CGAAGATCTGCAT 4895322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703663489280