Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq3 123 2e-23
>seq3
Length=8560927
Score = 123 bits (136), Expect = 2e-23
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || | ||| || || ||||| |||||||||||||| || || |||||||| || ||
Sbjct 4894868 CCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 4894927
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || |||| ||||| || || |||||||| |||| ||||| || || ||||
Sbjct 4894928 AGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGA 4894987
Query 33643 ACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCC 33699
| ||||| ||||| ||| || || || || | ||| | ||||| | | | |||
Sbjct 4894988 ATGCCTTCCTTGTCCTGAATCTTGCTCTT--GACGTTGTCGATCGTGTC-CGAGCTCTCC 4895044
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||| ||||| || || || || ||||| ||||||||||||||
Sbjct 4895045 ACCTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|| || || ||||| || |||||||| || || | || |||||||| || || |||||
Sbjct 4895132 TCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCCAATTGCTTGCCCGCAAAG 4895191
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT-CTGTTTCAACAT 33677
|||| ||||| || || |||| | ||||| ||||| || || || || || |
Sbjct 4895192 ATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGCTCTTG--ACGT 4895249
Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736
||| | |||||| || || || || | ||||||||| || || || || ||||| |
Sbjct 4895250 TGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTCA 4895309
Query 33737 CAAAGATCTGCAT 33749
| |||||||||||
Sbjct 4895310 CGAAGATCTGCAT 4895322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703663489280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |