Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 159 3e-34 seq3 86.0 6e-12 >seq4 Length=4919768 Score = 159 bits (176), Expect = 3e-34 Identities = 962/1526 (63%), Gaps = 39/1526 (3%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951 || || ||||| || || || || || ||||| | |||| || | ||| ||| | || Sbjct 3841282 TTAACGACTTGGAATTCTCCGGCAAGGACACGGC-GAGAGTAGATATTTGACGTGTATGG 3841340 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 || ||| | || || ||||||| || || | || | || |||||||| || || Sbjct 3841341 TTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGAC 3841400 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGG--ATGTTGTCCTTCAAAGTTTGCCAGTCC 147069 | || || || || | || | | || || | | | ||||| | | ||| ||| Sbjct 3841401 AAGCAGAGAGTTGCGAACGCCAT--GTTTGGCAATCTCGGCTTTCAAGGAGTCCCAATCC 3841458 Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 |||| |||||| || ||||||||||||||||| || || | || | | |||| Sbjct 3841459 CACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTGAGACGGGG 3841518 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||||| || | || ||| |||| | || || | ||| || || ||| Sbjct 3841519 CTGCCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAGTGAGA 3841578 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 || ||| ||| |||||||| |||||| | || || | || || || Sbjct 3841579 GCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTGGCCTCGGGAGAGTCA 3841638 Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 | || | ||||||| | ||||||||||| | ||| || | || | |||| ||| Sbjct 3841639 AAGGGAAGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACAGGC 3841698 Query 147310 CGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATC 147369 ||||| |||||| ||| || | | |||||||| |||| ||| || ||| Sbjct 3841699 CGATGTCGGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTGATATCGATGATC 3841758 Query 147370 TTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTC 147429 ||||| ||||| || || |||| ||||| | || | || ||||| Sbjct 3841759 TTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCAAAGTCATATTCA 3841818 Query 147430 CC----GTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGC 147485 || | || |||| | | | | | |||| || ||||||||||| || || Sbjct 3841819 CCTCGAGCCTGATCCACGAAGGTAGGG----AGAGCGAGGGAGGCCAGATTGCACACAGC 3841874 Query 147486 CGTCTCTTCGGCGTCGCTGTAC--TGCACGATTTCGGCGCACAGGTTGCTGCATTTTATG 147543 ||| || | |||||| | || || |||| ||| ||||| || | ||| Sbjct 3841875 GACCTCGTCAGGA--GCTGTAAATTCGACAATCTCGGTGCAGAGGTTTGAGCTTCGGATG 3841932 Query 147544 ACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGT 147603 ||||| || | ||| ||||| || | |||||| ||||| ||| | |||||||| || Sbjct 3841933 GTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTAGGGG 3841992 Query 147604 CCGCCGGTCTCGACTTGCGTTTCAACGATA--AACCTATGCAGGTCCTGCGCTCGCACCC 147661 || |||||| || | || | |||| | | || || | ||| || ||| Sbjct 3841993 GTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCAT--AGCTTCTGGGCCTTAACCG 3842050 Query 147662 GCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGT 147721 ||| ||| || ||||| || ||||| | |||||||| || || |||||||| | Sbjct 3842051 TCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTTGAAGTCGTCGCCAT 3842110 Query 147722 AGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGT 147781 || || || || || || || ||| || || | || | |||| | || | | Sbjct 3842111 AGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTTGGTTCTTCT 3842170 Query 147782 TAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGC 147841 || ||| ||| |||| || || |||||| || || | | ||||| ||| || Sbjct 3842171 CGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCTCTGA 3842230 Query 147842 AATCCTCGGCGCCCATGTTGCGTTTCAAATT-AAGCACGCTATAGATGTCGGCGTGCCAG 147900 || || ||| ||| | || || ||| | | | | | ||| |||||||| Sbjct 3842231 CCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAA-ACGTCTGCGTGCCAT 3842289 Query 147901 GGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGC 147957 ||||| | ||||| ||| | |||||| |||||| |||||||||||||| | ||| Sbjct 3842290 GGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGTAGCGA 3842349 Query 147958 ACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT---- 148013 | | ||||| || ||||| | |||||| || || | | ||||| ||||| Sbjct 3842350 GCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTCCCT 3842409 Query 148014 GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCC 148073 | ||| | | ||| || | ||| | | ||| || | |||||| || ||| | Sbjct 3842410 GCAATATAGGATCCTGTGGCACGAATGCAAT--GGGCA--TTGAGGCCAATACCTCCGGC 3842465 Query 148074 GTACTTTGATATGGCAGCGCAA-TCGCCCAA-TGTCGTGTAGATGCCGTCGATGCTGTCG 148131 ||| || || || ||| || | |||| | ||||||| ||||||||||| Sbjct 3842466 AGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCAT--AGATGCCCTCGATGCTGTCT 3842523 Query 148132 TTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAA 148191 | ||| | | | | ||| || || || ||| || || | ||||| || ||| Sbjct 3842524 TCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAAC 3842583 Query 148192 AGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCG 148251 || ||||| ||||| || || | || || ||| | | || ||||||||||| Sbjct 3842584 AGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCAATAGCC 3842643 Query 148252 TCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGT 148311 | ||| | ||||||||| ||||| || | || || |||||||||||||| || || ||| Sbjct 3842644 TTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGACGT 3842703 Query 148312 TCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAG 148371 || || ||||| || |||||||| || ||| | || | || ||| | ||||| Sbjct 3842704 TCTGCGACTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAAGCCAAAA 3842763 Query 148372 TACTTGTAATCAAAATCTAGCTCGTA 148397 || | || | || ||| | ||||| Sbjct 3842764 TATTGATAGTTGAAGTCTCGGTCGTA 3842789 >seq3 Length=8560927 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||||||| || || ||| ||||||||||| |||| Sbjct 4895357 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCG 4895416 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || ||||| || || ||||| ||||| ||||| || || || || | Sbjct 4895417 AAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACG 4895476 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | | ||| || || | || | || || ||||||| ||||| Sbjct 4895477 TTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTC 4895536 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 4895537 ACGAAGATCTGCATG 4895551 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| ||||| ||||| |||| | ||| || || ||||||||||| || || Sbjct 4894873 ACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGT 4894932 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||||| | ||| || |||| | |||| || |||||||| || || || ||||| Sbjct 4894933 CCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGAATGCC 4894992 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || ||| || || | | || | || || | |||||| || | Sbjct 4894993 TTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAG 4895052 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 ||| | ||| || || |||| |||||| | || ||||||||| Sbjct 4895053 CGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCATG 4895095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610699558240