Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4 141 1e-27 >seq4 Length=4919768 Score = 141 bits (156), Expect = 1e-27 Identities = 268/396 (68%), Gaps = 15/396 (4%) Strand=Plus/Minus Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849 |||| || || ||||| | |||||||||||||| || |||| | |||| | | Sbjct 3842711 GTCGCAGAACGTCCCCAACACATGCTCATGCGTGTGGCAGTTGGTATTCATGGC---GAC 3842655 Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTG 259909 ||||| || || || | ||| |||||| | |||||| ||| ||| Sbjct 3842654 GACGTTGAAAAGGCTATTGAG------------ACCTACAACCTCATGTCCCAGAAGTGC 3842607 Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969 |||||| || | |||||||| || |||||||| || || | || ||| || || Sbjct 3842606 TTCACCCACGCTTCACCCACGCTGTTCAATGCCGGAACACCTCAACCTCAGCTGTCCTCC 3842547 Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| || | |||||||| | || |||||||||||||||||||| |||||| Sbjct 3842546 TGCTTCTTGATAGACATGAAAGAAGACAGCATCGAGGGCATCTATGACACTCTCAAGACT 3842487 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 || || | || |||||| | ||||| || || || | || || | || ||| Sbjct 3842486 TGTGCCATGATTTCCAAGACTGCCGGAGGTATTGGCCTCAATGCCCATTGCATTCGTGCC 3842427 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149 | || |||| | || || ||||| ||| ||||| || || | |||||||||||| Sbjct 3842426 ACAGGATCCTATATTGCAGGGACCAATGGCACCTCCAATGGTCTCATCCCCATGCTTCGC 3842367 Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 || || ||| | || || ||||||||||||||| || Sbjct 3842366 GTCTTCAACAATACTGCTCGCTACGTCGACCAGGGC 3842331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177803098045608