Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq3 163 3e-35
seq7 93.3 4e-14
>seq3
Length=8560927
Score = 163 bits (180), Expect = 3e-35
Identities = 177/231 (77%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| |||| ||| ||||| |||| || |||||||| || |||||||| || | |
Sbjct 4894868 CCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 4894927
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| |||| |||||| || ||||| |||| ||||| ||||||| |||
Sbjct 4894928 AGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGA 4894987
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTC---GCTCGATTC 35685
| || ||||||||| ||||| ||| | |||| | | |||||| |||| ||
Sbjct 4894988 ATGCCTTCCTTGTCCTGAATCTTGCTCTTGAC-GTTGTCGATCGTGTCCGAGCTC---TC 4895043
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||||| ||| ||||| || |||||||||||||||||||| ||||||||
Sbjct 4895044 CACCTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
Score = 111 bits (122), Expect = 1e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||| || || || | || || ||||| || || || ||
Sbjct 4895359 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAA 4895418
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | ||||| || ||| |||||| |||||| ||| | ||
Sbjct 4895419 AATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGA-CGT 4895477
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||||| || || ||||| | ||||| || || || ||||| |||||||
Sbjct 4895478 TGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCA 4895537
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 4895538 CGAAGATCTGCAT 4895550
>seq7
Length=2048283
Score = 93.3 bits (102), Expect = 4e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || || || |||| || |||||||| || || || |
Sbjct 22036 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGA 21977
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
|||| ||||||||||| | || | || ||||||||| |||||| ||| | | |
Sbjct 21976 TCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 21917
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||||||| ||| || ||||| | ||||| || || |||||
Sbjct 21916 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 21871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793126666720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |