Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 7e-24
seq7 105 7e-18
seq4 102 8e-17
seq9 93.3 4e-14
>seq3
Length=8560927
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| ||||| || ||||| || |||||||||||||
Sbjct 4895324 CCACCGCGGAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 4895383
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || |||||||||||||| || ||||| | |||||||| ||||| ||
Sbjct 4895384 AGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGA 4895443
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| ||||| || || || || ||||| ||| | |||||| || || ||
Sbjct 4895444 ATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACC 4895503
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| ||||| || || || || ||||| ||||| || |||||
Sbjct 4895504 TCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
Score = 113 bits (124), Expect = 5e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| ||||| ||||| |||||||| || ||||| |||||| | || | || ||
Sbjct 4895113 CACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTC 4895172
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
| || ||||| ||||| |||| ||||| || || ||||| |||||||| || || ||
Sbjct 4895173 CAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTGTCCTG 4895232
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || ||||| ||| | ||||||||||| || || ||||| || || || ||
Sbjct 4895233 GATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATCGTCTT 4895292
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| ||||| || |||||
Sbjct 4895293 CCCCGTCAAGGTTTTCACGAAGATCTGCAT 4895322
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGA 134557
||||| || | |||||| ||| ||||| || ||||||||||| | || | || |
Sbjct 4894880 CGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGC-GTCCGGCC 4894938
Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617
||| || | ||| ||||| ||||| |||| ||||| || || ||||| |||||||| ||
Sbjct 4894939 GTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGAATGCCTTCCTT 4894998
Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677
|| ||||| || ||||| ||| | ||||| || ||||| || || |||||
Sbjct 4894999 GTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTAAT 4895058
Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || |||||||| || || || |||||
Sbjct 4895059 CGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
>seq7
Length=2048283
Score = 105 bits (116), Expect = 7e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||||| | || | ||| || ||||| ||||| || || |
Sbjct 22036 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGA 21977
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
|||| |||||||| || ||||| |||||||| || || || || || ||||| ||
Sbjct 21976 TCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 21917
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||||||||| || || ||||| || ||||| || || || | || || ||||
Sbjct 21916 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 21857
Query 134704 A 134704
|
Sbjct 21856 A 21856
>seq4
Length=4919768
Score = 102 bits (112), Expect = 8e-17
Identities = 289/441 (66%), Gaps = 5/441 (1%)
Strand=Plus/Minus
Query 7551 CGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACAT 7610
||| ||||| ||||||||||| |||| ||||| || || ||||| ||||| ||| |
Sbjct 3842709 CGCAGAACGTCCCCAACACATGCTCATGCGTGTGGCAGTTGGTATTCATGGCGACGACGT 3842650
Query 7611 TGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCC 7670
||| || | || || ||| | | ||||| ||| || || |||||||| ||
Sbjct 3842649 TGAAAAGGCTATTGAGACCTACAACCTCATGTCCCAGAAGTGCTTCACCCACGCTTCACC 3842590
Query 7671 CACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCAT 7730
||| |||| || || ||| ||||| ||||||| || || ||| || |||
Sbjct 3842589 CACGCTGTTCAATGCCGGAACACCTCAACCTCAGCTGTCCTCCTGCTTCTTGATAGACAT 3842530
Query 7731 GCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCA 7789
| |||||||||||||| ||||| || |||| || | || ||| |||| |||||||
Sbjct 3842529 GAAAGAAGACAGCATCGAGGGCATCTATGACACTCT-CAAGACTTGTGCCATGATTTCCA 3842471
Query 7790 AATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCG 7849
| | ||| || || || || || | | | | || |||| || | || |
Sbjct 3842470 AGACTGCCGGAGGTATTGGCCTCAATGCCCATTGCATTCGTGCCACAGGATCCTATATTG 3842411
Query 7850 TGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGG 7909
||||| || | ||| ||| | |||||| | ||||| ||||| || | |
Sbjct 3842410 CAGGGACCAATGGCACCTCCAATGGTCTCATCCCCATGCTTCGCGTCTTCAACAATACTG 3842351
Query 7910 TGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGC 7966
|| | || |||||||| || ||||| ||| ||| ||||||||| | || |
Sbjct 3842350 CTCGCTACGTCGACCAGGGCGGTAACAAGCGTCCAGGTGCCTTTGCCATCTACCTCGAAC 3842291
Query 7967 CGTGGCACGCGGACATTTACG 7987
| |||||||| ||| ||| ||
Sbjct 3842290 CATGGCACGCAGACGTTTTCG 3842270
>seq9
Length=3042725
Score = 93.3 bits (102), Expect = 4e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| ||||| || ||||| || ||||||||||| || || ||||||||| | |||| ||
Sbjct 1318712 AGGCGCAAGACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGA 1318771
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || || || ||||| || || |||| |||||||| || || || ||||||||
Sbjct 1318772 CCGTCTTCAAGTTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCTTCC 1318831
Query 134616 TTTTCT 134621
|| |||
Sbjct 1318832 TTGTCT 1318837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397869331680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |