Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3 125 7e-24 seq7 105 7e-18 seq4 102 8e-17 seq9 93.3 4e-14 >seq3 Length=8560927 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| ||||| || ||||| || ||||||||||||| Sbjct 4895324 CCACCGCGGAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 4895383 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || |||||||||||||| || ||||| | |||||||| ||||| || Sbjct 4895384 AGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGA 4895443 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| ||||| || || || || ||||| ||| | |||||| || || || Sbjct 4895444 ATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACC 4895503 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || || || || ||||| ||||| || ||||| Sbjct 4895504 TCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| ||||| ||||| |||||||| || ||||| |||||| | || | || || Sbjct 4895113 CACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTC 4895172 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 | || ||||| ||||| |||| ||||| || || ||||| |||||||| || || || Sbjct 4895173 CAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTGTCCTG 4895232 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || ||||| ||| | ||||||||||| || || ||||| || || || || Sbjct 4895233 GATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATCGTCTT 4895292 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| ||||| || ||||| Sbjct 4895293 CCCCGTCAAGGTTTTCACGAAGATCTGCAT 4895322 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGA 134557 ||||| || | |||||| ||| ||||| || ||||||||||| | || | || | Sbjct 4894880 CGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGC-GTCCGGCC 4894938 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| || | ||| ||||| ||||| |||| ||||| || || ||||| |||||||| || Sbjct 4894939 GTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGAATGCCTTCCTT 4894998 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || ||||| || ||||| ||| | ||||| || ||||| || || ||||| Sbjct 4894999 GTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTAAT 4895058 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || |||||||| || || || ||||| Sbjct 4895059 CGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094 >seq7 Length=2048283 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || ||||||||||||| | || | ||| || ||||| ||||| || || | Sbjct 22036 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGA 21977 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 |||| |||||||| || ||||| |||||||| || || || || || ||||| || Sbjct 21976 TCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 21917 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||||||||| || || ||||| || ||||| || || || | || || |||| Sbjct 21916 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 21857 Query 134704 A 134704 | Sbjct 21856 A 21856 >seq4 Length=4919768 Score = 102 bits (112), Expect = 8e-17 Identities = 289/441 (66%), Gaps = 5/441 (1%) Strand=Plus/Minus Query 7551 CGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACAT 7610 ||| ||||| ||||||||||| |||| ||||| || || ||||| ||||| ||| | Sbjct 3842709 CGCAGAACGTCCCCAACACATGCTCATGCGTGTGGCAGTTGGTATTCATGGCGACGACGT 3842650 Query 7611 TGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCC 7670 ||| || | || || ||| | | ||||| ||| || || |||||||| || Sbjct 3842649 TGAAAAGGCTATTGAGACCTACAACCTCATGTCCCAGAAGTGCTTCACCCACGCTTCACC 3842590 Query 7671 CACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCAT 7730 ||| |||| || || ||| ||||| ||||||| || || ||| || ||| Sbjct 3842589 CACGCTGTTCAATGCCGGAACACCTCAACCTCAGCTGTCCTCCTGCTTCTTGATAGACAT 3842530 Query 7731 GCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCA 7789 | |||||||||||||| ||||| || |||| || | || ||| |||| ||||||| Sbjct 3842529 GAAAGAAGACAGCATCGAGGGCATCTATGACACTCT-CAAGACTTGTGCCATGATTTCCA 3842471 Query 7790 AATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCG 7849 | | ||| || || || || || | | | | || |||| || | || | Sbjct 3842470 AGACTGCCGGAGGTATTGGCCTCAATGCCCATTGCATTCGTGCCACAGGATCCTATATTG 3842411 Query 7850 TGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGG 7909 ||||| || | ||| ||| | |||||| | ||||| ||||| || | | Sbjct 3842410 CAGGGACCAATGGCACCTCCAATGGTCTCATCCCCATGCTTCGCGTCTTCAACAATACTG 3842351 Query 7910 TGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGC 7966 || | || |||||||| || ||||| ||| ||| ||||||||| | || | Sbjct 3842350 CTCGCTACGTCGACCAGGGCGGTAACAAGCGTCCAGGTGCCTTTGCCATCTACCTCGAAC 3842291 Query 7967 CGTGGCACGCGGACATTTACG 7987 | |||||||| ||| ||| || Sbjct 3842290 CATGGCACGCAGACGTTTTCG 3842270 >seq9 Length=3042725 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || ||||| || ||||||||||| || || ||||||||| | |||| || Sbjct 1318712 AGGCGCAAGACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGA 1318771 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || || || ||||| || || |||| |||||||| || || || |||||||| Sbjct 1318772 CCGTCTTCAAGTTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCTTCC 1318831 Query 134616 TTTTCT 134621 || ||| Sbjct 1318832 TTGTCT 1318837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397869331680