Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 199 5e-46
seq3 123 3e-23
>seq4
Length=4919768
Score = 199 bits (220), Expect = 5e-46
Identities = 1175/1857 (63%), Gaps = 37/1857 (2%)
Strand=Plus/Plus
Query 68402 TTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATAC 68461
|||| || ||||||||||| ||||| || || || | ||||||| ||||||||| |
Sbjct 3840971 TTGTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGC 3841030
Query 68462 TTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGA 68521
| || | ||| | || || | ||||| || | || || |||||||
Sbjct 3841031 TAGTGATCTTGCCCATGGTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGA 3841090
Query 68522 TGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAG 68581
|||| || || | || || ||||||| | | || ||| |||||||| | |
Sbjct 3841091 TGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCTGATTTCCCACACGG 3841150
Query 68582 TCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCAT 68638
||||| | | |||||| || | || | | | | | || || || || || || |
Sbjct 3841151 TCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGAGCCGCCTT 3841210
Query 68639 CGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAA 68698
||| ||| ||| |||||| || | ||| ||||| || || | | | |
Sbjct 3841211 CGGCTATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAACTAGATCCTTCA 3841270
Query 68699 GGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTAC 68758
| | || ||||| | ||| ||||| || | | || | |||| ||| |||||
Sbjct 3841271 GCAACCATGGGTTAACGACTTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTG 3841330
Query 68759 TGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCA 68818
|| |||||||| | | |||| || || || ||||| |||| || || ||||| ||||
Sbjct 3841331 ACGTGTATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCA 3841390
Query 68819 TAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTT 68878
|||| || || | | | || | || |||||| | || | |||| | |
Sbjct 3841391 TAGGGGCGACAAGCAGAGAGTTGCGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGT 3841450
Query 68879 TCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCC--GTT 68936
||||||||| || || || || || ||||| | |||||||| ||||| || ||
Sbjct 3841451 CCCAATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTG 3841510
Query 68937 ACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACT 68996
| | || || | ||||||||||| | ||| | || | || ||||| |||
Sbjct 3841511 AGACGGGGCTG--CCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGA 3841568
Query 68997 TGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTT 69055
|| | ||| | | ||||| ||||| || || | |||| || | | || || |
Sbjct 3841569 GGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTG-GCCT 3841627
Query 69056 CTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAA 69115
| || || || ||| | | | | || || ||||| || | || ||||| || |
Sbjct 3841628 CGGGAGAGTCAAAGGGAAGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCCA 3841687
Query 69116 TACCGATAGGTCTATGTCTCTTATTTGAACTT-TCAGCTTCTGGAATAGGATAATAATTA 69174
||||| ||| | ||||| | ||| ||| | ||||| |||| ||||| || ||
Sbjct 3841688 GACCGACAGGCCGATGTCGGA-AGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTG 3841746
Query 69175 ATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGA 69234
||||| || || || || || || || || |||| | || || | || |
Sbjct 3841747 ATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCA 3841806
Query 69235 AAATCAAAT---CGTCCATCTATA---ACAAACATATTCAGTGCTACAGATGCTAGATTA 69288
|| ||| || | || | | | || || || || || | || || |||||
Sbjct 3841807 AAGTCATATTCACCTCGAGCCTGATCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTG 3841866
Query 69289 CAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACAT 69348
|| || || ||||| | || | || | ||| | ||||| || || || || | |
Sbjct 3841867 CACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGTGCAGAGGTTTGAGCTT 3841926
Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408
||| || |||| || | ||| || |||||| | || ||||||||||||||||| ||
Sbjct 3841927 CGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATG 3841986
Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTT 69468
| || || ||||| || |||| | |||| |||| | ||| | | || | ||
Sbjct 3841987 TAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCATA-GCTTCTGGGCCTT 3842045
Query 69469 ATTACGGTCTTGTAACG-CTTCTCT--TTTTCATAT-TGT-GTATATAGCCGTTCGAATT 69523
| || |||| | || | || || || || ||| | | ||| | || | ||| |
Sbjct 3842046 A--ACCGTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTT--GAAGT 3842101
Query 69524 CATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583
| || || | || ||| | | ||||| |||| || || | | || |||| | |
Sbjct 3842102 CGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTT 3842161
Query 69584 CATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCT 69642
| | || || |||| ||| || | || ||| |||| || || ||| || | ||
Sbjct 3842162 GGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGC-ATAGAACAAGTCG 3842220
Query 69643 CTGGTTCTATTTTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTCCATAATATC 69701
| | ||| ||||| || || || | ||| | | || |||| || | || ||
Sbjct 3842221 CGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAG-TCGAAAACGTC 3842279
Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761
| ||||||||||| || || || || | | | || || || || || || ||||| ||
Sbjct 3842280 TGCGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTC 3842339
Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821
| ||| | ||||| || || |||| | ||||| || || | |||||| || | ||
Sbjct 3842340 GACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCC 3842399
Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATT 69879
||| || || | |||||| |||| | || ||||| | | || | || || ||
Sbjct 3842400 ATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTG--AGGCCAATA 3842457
Query 69880 CCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATG 69939
||||| || | || || || | |||||| || | |||||||| || ||||| |||
Sbjct 3842458 CCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATG 3842517
Query 69940 CTATCATCTATCATGT-TAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998
|| || ||| |||||| || ||| || ||| |||| ||| | || ||||| ||
Sbjct 3842518 CTGTCTTCTTTCATGTCTATCAAG-AAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGC 3842576
Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058
||| || | || || || ||||| ||||| || || | || | || ||||| || ||
Sbjct 3842577 ATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTC 3842636
Query 70059 AATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118
|||||| ||| | || |||||| || | || |||||||| | ||| || ||
Sbjct 3842637 AATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTG 3842696
Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178
|| |||||| | || || || || | ||||||||| | |||| || || ||
Sbjct 3842697 GGGACGTTCTGCGACTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAA 3842756
Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235
|||||||| | || ||||||| ||||| | ||| ||||||| | || |||
Sbjct 3842757 GCCAAAATATTGATAGTTGAAGTCTCGGTCGTAGACAATTGCAGAATTGAATTCATC 3842813
>seq3
Length=8560927
Score = 123 bits (136), Expect = 3e-23
Identities = 223/323 (69%), Gaps = 5/323 (2%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||| || ||||| ||| | |||||||| | || | ||||| || || |||||
Sbjct 3180816 GCATGCAAAGTCCGTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAG 3180757
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| || || | |||||||| || || || ||||| |||||||| |||||
Sbjct 3180756 GCCGGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAA 3180697
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT-- 39793
||||||||| || |||||||| ||||| | | || | | || | || |||| |
Sbjct 3180696 GATGCCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAAAGCTCGACTCTTTATCTGC 3180637
Query 39794 -ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
||||| | ||||| || |||||||| | || || ||||| || || || |
Sbjct 3180636 GATCCATCGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGTC 3180577
Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911
|||||||| |||| || || | ||| || ||||| || || || | || || ||||
Sbjct 3180576 AAAGAGAT-ATGTCTTCTCTTTGGGATCCTTCACATACGTGTCAATGAGAAGGCTGTACA 3180518
Query 39912 TTTCTGAATGGATGTTTTCAATC 39934
| || ||||||||||| || |||
Sbjct 3180517 TCTCCGAATGGATGTTCTCCATC 3180495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908078745760
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