Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4 199 5e-46 seq3 123 3e-23 >seq4 Length=4919768 Score = 199 bits (220), Expect = 5e-46 Identities = 1175/1857 (63%), Gaps = 37/1857 (2%) Strand=Plus/Plus Query 68402 TTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATAC 68461 |||| || ||||||||||| ||||| || || || | ||||||| ||||||||| | Sbjct 3840971 TTGTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGC 3841030 Query 68462 TTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGA 68521 | || | ||| | || || | ||||| || | || || ||||||| Sbjct 3841031 TAGTGATCTTGCCCATGGTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGA 3841090 Query 68522 TGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAG 68581 |||| || || | || || ||||||| | | || ||| |||||||| | | Sbjct 3841091 TGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCTGATTTCCCACACGG 3841150 Query 68582 TCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCAT 68638 ||||| | | |||||| || | || | | | | | || || || || || || | Sbjct 3841151 TCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGAGCCGCCTT 3841210 Query 68639 CGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAA 68698 ||| ||| ||| |||||| || | ||| ||||| || || | | | | Sbjct 3841211 CGGCTATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAACTAGATCCTTCA 3841270 Query 68699 GGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTAC 68758 | | || ||||| | ||| ||||| || | | || | |||| ||| ||||| Sbjct 3841271 GCAACCATGGGTTAACGACTTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTG 3841330 Query 68759 TGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCA 68818 || |||||||| | | |||| || || || ||||| |||| || || ||||| |||| Sbjct 3841331 ACGTGTATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCA 3841390 Query 68819 TAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTT 68878 |||| || || | | | || | || |||||| | || | |||| | | Sbjct 3841391 TAGGGGCGACAAGCAGAGAGTTGCGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGT 3841450 Query 68879 TCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCC--GTT 68936 ||||||||| || || || || || ||||| | |||||||| ||||| || || Sbjct 3841451 CCCAATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTG 3841510 Query 68937 ACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACT 68996 | | || || | ||||||||||| | ||| | || | || ||||| ||| Sbjct 3841511 AGACGGGGCTG--CCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGA 3841568 Query 68997 TGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTT 69055 || | ||| | | ||||| ||||| || || | |||| || | | || || | Sbjct 3841569 GGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTG-GCCT 3841627 Query 69056 CTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAA 69115 | || || || ||| | | | | || || ||||| || | || ||||| || | Sbjct 3841628 CGGGAGAGTCAAAGGGAAGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCCA 3841687 Query 69116 TACCGATAGGTCTATGTCTCTTATTTGAACTT-TCAGCTTCTGGAATAGGATAATAATTA 69174 ||||| ||| | ||||| | ||| ||| | ||||| |||| ||||| || || Sbjct 3841688 GACCGACAGGCCGATGTCGGA-AGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTG 3841746 Query 69175 ATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGA 69234 ||||| || || || || || || || || |||| | || || | || | Sbjct 3841747 ATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCA 3841806 Query 69235 AAATCAAAT---CGTCCATCTATA---ACAAACATATTCAGTGCTACAGATGCTAGATTA 69288 || ||| || | || | | | || || || || || | || || ||||| Sbjct 3841807 AAGTCATATTCACCTCGAGCCTGATCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTG 3841866 Query 69289 CAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACAT 69348 || || || ||||| | || | || | ||| | ||||| || || || || | | Sbjct 3841867 CACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGTGCAGAGGTTTGAGCTT 3841926 Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408 ||| || |||| || | ||| || |||||| | || ||||||||||||||||| || Sbjct 3841927 CGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATG 3841986 Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTT 69468 | || || ||||| || |||| | |||| |||| | ||| | | || | || Sbjct 3841987 TAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCATA-GCTTCTGGGCCTT 3842045 Query 69469 ATTACGGTCTTGTAACG-CTTCTCT--TTTTCATAT-TGT-GTATATAGCCGTTCGAATT 69523 | || |||| | || | || || || || ||| | | ||| | || | ||| | Sbjct 3842046 A--ACCGTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTT--GAAGT 3842101 Query 69524 CATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583 | || || | || ||| | | ||||| |||| || || | | || |||| | | Sbjct 3842102 CGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTT 3842161 Query 69584 CATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCT 69642 | | || || |||| ||| || | || ||| |||| || || ||| || | || Sbjct 3842162 GGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGC-ATAGAACAAGTCG 3842220 Query 69643 CTGGTTCTATTTTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTCCATAATATC 69701 | | ||| ||||| || || || | ||| | | || |||| || | || || Sbjct 3842221 CGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAG-TCGAAAACGTC 3842279 Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761 | ||||||||||| || || || || | | | || || || || || || ||||| || Sbjct 3842280 TGCGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTC 3842339 Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821 | ||| | ||||| || || |||| | ||||| || || | |||||| || | || Sbjct 3842340 GACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCC 3842399 Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATT 69879 ||| || || | |||||| |||| | || ||||| | | || | || || || Sbjct 3842400 ATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTG--AGGCCAATA 3842457 Query 69880 CCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATG 69939 ||||| || | || || || | |||||| || | |||||||| || ||||| ||| Sbjct 3842458 CCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATG 3842517 Query 69940 CTATCATCTATCATGT-TAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998 || || ||| |||||| || ||| || ||| |||| ||| | || ||||| || Sbjct 3842518 CTGTCTTCTTTCATGTCTATCAAG-AAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGC 3842576 Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058 ||| || | || || || ||||| ||||| || || | || | || ||||| || || Sbjct 3842577 ATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTC 3842636 Query 70059 AATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 |||||| ||| | || |||||| || | || |||||||| | ||| || || Sbjct 3842637 AATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTG 3842696 Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178 || |||||| | || || || || | ||||||||| | |||| || || || Sbjct 3842697 GGGACGTTCTGCGACTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAA 3842756 Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 |||||||| | || ||||||| ||||| | ||| ||||||| | || ||| Sbjct 3842757 GCCAAAATATTGATAGTTGAAGTCTCGGTCGTAGACAATTGCAGAATTGAATTCATC 3842813 >seq3 Length=8560927 Score = 123 bits (136), Expect = 3e-23 Identities = 223/323 (69%), Gaps = 5/323 (2%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||| ||| | |||||||| | || | ||||| || || ||||| Sbjct 3180816 GCATGCAAAGTCCGTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAG 3180757 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| || || | |||||||| || || || ||||| |||||||| ||||| Sbjct 3180756 GCCGGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAA 3180697 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT-- 39793 ||||||||| || |||||||| ||||| | | || | | || | || |||| | Sbjct 3180696 GATGCCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAAAGCTCGACTCTTTATCTGC 3180637 Query 39794 -ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| | ||||| || |||||||| | || || ||||| || || || | Sbjct 3180636 GATCCATCGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGTC 3180577 Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 |||||||| |||| || || | ||| || ||||| || || || | || || |||| Sbjct 3180576 AAAGAGAT-ATGTCTTCTCTTTGGGATCCTTCACATACGTGTCAATGAGAAGGCTGTACA 3180518 Query 39912 TTTCTGAATGGATGTTTTCAATC 39934 | || ||||||||||| || ||| Sbjct 3180517 TCTCCGAATGGATGTTCTCCATC 3180495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908078745760