Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 5e-12 >seq3 Length=8560927 Score = 86.0 bits (94), Expect = 5e-12 Identities = 220/327 (67%), Gaps = 15/327 (5%) Strand=Plus/Plus Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGG 44023 || || || || |||||||| |||||||| ||||| || || ||||| | || ||| Sbjct 3180496 ATGGAGAACATCCATTCGGAGATGTACAGCCTTCTCATTGACACGTATGTGAAGGATCCC 3180555 Query 44024 CACGAGAAG-CATCGAT-TGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAA 44080 | |||||| ||| || | ||| | || || || ||| | || ||| ||| | ||| Sbjct 3180556 AAAGAGAAGACAT--ATCTCTTTGACGCCATTGACACAATCCCATGC-ATTCGCAAGAAA 3180612 Query 44081 GCAGACTGGGCCCTTAAATGGAT---AAATTCAAATGATTC---TTTTGGAGAACGACTT 44134 ||||||||||| | |||||| | || || || || |||| | || | Sbjct 3180613 GCAGACTGGGCTTTGCGATGGATCGCAGAT---AAAGAGTCGAGCTTTGCCCAGCGGTTA 3180669 Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || || ||||||| || |||||||| ||||| || ||||| ||||| || || || ||| Sbjct 3180670 GTTGCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCAGCGATCTTCTGG 3180729 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 | |||| || ||||||| || | || || || || ||| | || |||||| Sbjct 3180730 CTCAAGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTCCCGTGAT 3180789 Query 44255 GAAGGCTTACATTGCGATTTTGCTTGC 44281 || || | ||| || ||||| ||| Sbjct 3180790 GAGGGTATGCATACGGACTTTGCATGC 3180816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455593104420