Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3 86.0 5e-12
>seq3
Length=8560927
Score = 86.0 bits (94), Expect = 5e-12
Identities = 220/327 (67%), Gaps = 15/327 (5%)
Strand=Plus/Plus
Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGG 44023
|| || || || |||||||| |||||||| ||||| || || ||||| | || |||
Sbjct 3180496 ATGGAGAACATCCATTCGGAGATGTACAGCCTTCTCATTGACACGTATGTGAAGGATCCC 3180555
Query 44024 CACGAGAAG-CATCGAT-TGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAA 44080
| |||||| ||| || | ||| | || || || ||| | || ||| ||| | |||
Sbjct 3180556 AAAGAGAAGACAT--ATCTCTTTGACGCCATTGACACAATCCCATGC-ATTCGCAAGAAA 3180612
Query 44081 GCAGACTGGGCCCTTAAATGGAT---AAATTCAAATGATTC---TTTTGGAGAACGACTT 44134
||||||||||| | |||||| | || || || || |||| | || |
Sbjct 3180613 GCAGACTGGGCTTTGCGATGGATCGCAGAT---AAAGAGTCGAGCTTTGCCCAGCGGTTA 3180669
Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194
|| || ||||||| || |||||||| ||||| || ||||| ||||| || || || |||
Sbjct 3180670 GTTGCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCAGCGATCTTCTGG 3180729
Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254
| |||| || ||||||| || | || || || || ||| | || ||||||
Sbjct 3180730 CTCAAGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTCCCGTGAT 3180789
Query 44255 GAAGGCTTACATTGCGATTTTGCTTGC 44281
|| || | ||| || ||||| |||
Sbjct 3180790 GAGGGTATGCATACGGACTTTGCATGC 3180816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455593104420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |