Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 3e-22
seq4 84.2 2e-11
>seq3
Length=8560927
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| ||||| | || | |||| || | ||| || || || || || ||||||||||
Sbjct 4895322 TGCCACCGCGGAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 4895381
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
||| | || | || ||||||||||| |||||| ||||||| ||||| || || || |
Sbjct 4895382 TCAGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAG 4895441
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||||| || ||||||| || | | | || | ||||| ||| || |
Sbjct 4895442 GAATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGA 4895501
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || ||||| || | ||||| |||| |||||||| ||||| |||||
Sbjct 4895502 CCTCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||| || ||||||||||| ||||| |||| || || || || || ||||||||
Sbjct 4894867 GCCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGA 4894926
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
|| | || ||||||| | ||| || ||||| | || || |||||||| ||||||||
Sbjct 4894927 CAGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGG 4894986
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| || || || || |||||| | || | | | || | ||||| | | || ||
Sbjct 4894987 AATGCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCAC 4895046
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | || ||||||| ||||||||||||||| |||||
Sbjct 4895047 CTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
>seq4
Length=4919768
Score = 84.2 bits (92), Expect = 2e-11
Identities = 209/317 (66%), Gaps = 3/317 (1%)
Strand=Plus/Plus
Query 131735 TTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTG 131794
|| || ||||| |||| ||| || ||||| ||||| | || | || | || |||
Sbjct 3842260 TTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGA 3842319
Query 131795 CGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGC 131851
||||| |||||| || | || | ||| | | |||||| | ||||| | ||||||
Sbjct 3842320 CGCTTGTTACCGCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGG 3842379
Query 131852 TCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTG 131911
| ||| |||| | | |||||||| | ||| ||| || |||| | ||
Sbjct 3842380 ATGAGACCATTGGAGGTGCCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAA 3842439
Query 131912 TGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTG 131971
|| | ||||| |||||||||||| | || || || | || || | | ||||||
Sbjct 3842440 TGGGCATTGAGGCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTG 3842499
Query 131972 TTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGT 132031
| |||||| || || | |||||| | ||||| | || ||||| ||||||| |||
Sbjct 3842500 TCATAGATGCCCTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGA 3842559
Query 132032 TGGTGAAATGTGCCGGC 132048
| ||| ||| |||||
Sbjct 3842560 GGTTGAGGTGTTCCGGC 3842576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933964973408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |