Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4 190 3e-43 >seq4 Length=4919768 Score = 190 bits (210), Expect = 3e-43 Identities = 1128/1780 (63%), Gaps = 65/1780 (4%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 ||||||| || || ||| |||| ||| || ||||||||||| ||||||||||| | Sbjct 3840944 TGAACTGGATAGGCTGGGTGGCCGCCATTGTGCGCAGATAGTACATGCCGGTCTTGAGCC 3841003 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 110450 | ||||||| | | |||||| || || |||| ||| || || |||| | | Sbjct 3841004 CCATTTTCCATCCCGCGAAATGCATGCTAGTGATCTTGCCCATGGTCGG---TTCCTTCA 3841060 Query 110451 AGAG---GTTCATA--CTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATC 110505 || | ||| | | || |||| | || |||||| || || | || ||||| | Sbjct 3841061 AGTGAATGTTGAGAGACTGGGACT--GATCGATGAAGGCACCGCGGTCCGCTGCCATTTG 3841118 Query 110506 AATGACA-TCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564 | ||| ||| | || | ||||||| || || ||||||| ||||| || | | Sbjct 3841119 CAGGACTGTCCGTTGGCTGA-TTTCCCACACGGTCTTATAGAGAGCTTTGATGTCTGCGG 3841177 Query 110565 GGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC-ATGA---GATCCTTCATA 110620 |||| | | ||| |||||||| || || |||||| | |||| ||| ||||||| Sbjct 3841178 GGATGTTGGGGATGTTCTGGATCGAGCC----GCCTTCGGCTATGATTCGATTCTTCATA 3841233 Query 110621 TCCTTGGACCAGAGACCAA--TCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGA 110678 | | |||||| || || | || || || || || | | ||| || | Sbjct 3841234 TTATCGGACCACAGGCCCAAGTCAACTAGA--TCCTTCAGCAACCATGGGTTAACGACTT 3841291 Query 110679 CAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATT 110738 || || || || ||| | | |||||| |||| ||||||||||| || |||| Sbjct 3841292 GGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTGACGTGTATGGTTCGAAACATT 3841351 Query 110739 CATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGT 110798 | || || || | || || | ||| ||||| || ||||| || || | | ||| || Sbjct 3841352 CGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGACAAGCAGAGAGT 3841411 Query 110799 TACGAAGACCCTTCTCCTTGAT----GCGTTCCTTGAGAAC--ATCCCAGTCGTAGTTGA 110852 | |||| || | | || || ||| ||| | |||||| || || Sbjct 3841412 TGCGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGTCCCAATCCCACAGGTCC--GA 3841469 Query 110853 GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCT 110912 | || | || |||| ||||||| | ||||| | || || || |||| |||| Sbjct 3841470 G---GGAGTGACGTTCC-ACATGTCGTATTGAAGAATGCCCTGTGAGACGGGGCTGCCCT 3841525 Query 110913 CAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGT 110972 | | |||||||||| || || | | || | ||| || || || | || | Sbjct 3841526 CGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAGTGAGAGCAGCAT 3841585 Query 110973 GATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGT 111032 | || |||||||||||||| || ||||| | | |||| || || ||||| | | Sbjct 3841586 GGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTGGCCTCGGGAGAGTCAAAGG-GA 3841644 Query 111033 AGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 111091 || ||| | || || |||| |||||||||||||| |||| ||| | ||| | ||| Sbjct 3841645 AGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACAGGCCGATGT 3841704 Query 111092 CGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTT 111151 || | || ||| || ||||||||| | || | || |||| |||| Sbjct 3841705 CGGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTGATATCGATGATCTTGTTT 3841764 Query 111152 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA---AGTGCGA 111208 || || || || | | || | |||||||| || | ||| | | ||| Sbjct 3841765 AGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCAAAGTCATATTCACCTCGA 3841824 Query 111209 GTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 111268 | || || || | | || || |||| || |||| |||||| ||||| ||| Sbjct 3841825 GCCTGATCCACGA---AGGTAGGGAGAGCGAGGGAGGCCAGATTGCACACAGCGACCTCG 3841881 Query 111269 TCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAA 111328 || | |||| | || | ||| || || || | ||| || || || || ||||| Sbjct 3841882 TCAGGAGCTGTAAATTCGACAATCTCGGTGCAGAGGTTTGAGCTTCGGATGGTACCCAAG 3841941 Query 111329 TTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 111388 ||||| ||||| ||||| | ||||| || |||||||| ||||||||||| ||||| ||| Sbjct 3841942 TTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTAGGGGGTCCCAGTC 3842001 Query 111389 TCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTAC-AATGGCGTTGG 111446 || ||||||| | ||| ||||| | ||| | | || | | || | ||||| Sbjct 3842002 TCGGTCTGTGCCTCGAGGATAGCATACCATAGCTTCTGGGCCTTAACCGTCTGGCG--AC 3842059 Query 111447 CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGG 111506 | ||||||||| |||||| | ||| || | | || || || || |||| | Sbjct 3842060 CACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTTGAAGTCGTCGCCATAGACGTCAG 3842119 Query 111507 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCG 111564 ||||| || |||| | || ||||| || | ||| | | ||| ||| || || Sbjct 3842120 CTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACT--CTTGGTTCTTCTCGACACG 3842177 Query 111565 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTT 111623 | |||||| | ||| ||| ||||||||| | || | || | | | | || |||||| Sbjct 3842178 TTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCTCTGA-CCTCTT 3842236 Query 111624 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 111683 | | || ||||| ||| | | | ||| || | | || ||||||||||| || | Sbjct 3842237 CCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTTCGA 3842296 Query 111684 GATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTG 111737 | |||| || | | || | ||||| || | || | || ||||| || | Sbjct 3842297 GGTAGATGGCAAAGGCACC---TGGACGCTTGTTACCGCCCTGGTCGACGTAGCGAGCAG 3842353 Query 111738 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 111797 | ||| || ||||||||||| || || | ||||| || ||||| ||||| || Sbjct 3842354 TATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTCCCTGCAA 3842413 Query 111798 TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 111857 || ||| |||| | | |||| | | |||||||| || || ||| | Sbjct 3842414 TATAGGATCCTGTGGCACGAATGCAATGGGCATTGAGGCCAATACCTCCGGCAGTCTTGG 3842473 Query 111858 AGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGG 111917 | || ||||| | | ||||| ||||||| || | ||| ||| || || || Sbjct 3842474 AAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATGCTGTCTTCTTTCATGT 3842533 Query 111918 CGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG 111977 | || | |||||| ||||| ||| ||| ||||| || |||||||| || || |||| Sbjct 3842534 CTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAACAGCGTGGGTG 3842593 Query 111978 TTGCGTGAATGAA-CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATG 112036 ||||| |||| || | |||||||| || ||| ||||| | | |||| | Sbjct 3842594 AAGCGTGGGTGAAGCACTTC-TGGGACATGAGGTTGTAGGTCTCAATAGCCTTTTCAACG 3842652 Query 112037 TCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076 || || || || || || | ||| || ||||||| ||||| Sbjct 3842653 TCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGT 3842692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031340566400