Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq4 188 9e-43
seq3 82.4 9e-11
>seq4
Length=4919768
Score = 188 bits (208), Expect = 9e-43
Identities = 1115/1758 (63%), Gaps = 53/1758 (3%)
Strand=Plus/Plus
Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887
||| ||| || || |||||||| || |||||||||||| ||||| | | ||||
Sbjct 3840967 GCCATTGTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGC 3841026
Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAG---GTTCATACTTTGGGAT 117944
|| | | |||| | ||| || |||| | ||| | ||| | | |||||
Sbjct 3841027 ATGCTAGTGATCTTGCCCATGGTCGG---TTCCTTCAAGTGAATGTTGAGAGACTGGGAC 3841083
Query 117945 TGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTC 118003
|||||||||||| || || ||||| ||||| | | || ||| | || ||||||
Sbjct 3841084 TGATCGATGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCT-GATTTC 3841142
Query 118004 CCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 118063
|||||| ||| | ||||| || || || | ||||| | ||| || ||||| ||
Sbjct 3841143 CCACACGGTCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGA 3841202
Query 118064 TCCACCCGCCTT-GACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTT 118119
|| ||||| | | |||| ||| |||||||| | ||||| || || | |
Sbjct 3841203 GCC----GCCTTCGGCTATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAA 3841258
Query 118120 TGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 118177
||||||| || | ||| | | || || || || || || ||| || |
Sbjct 3841259 CTAGATCCTTCAGCAACCATGGGT--TAACGACTTGGAATTCTCCGGCAAGGACACGGCG 3841316
Query 118178 CAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG 118236
||| |||||||| | ||||||||| || || || || ||||| || | || || | |
Sbjct 3841317 -AGAGTAGATATTTGACGTGTATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGG 3841375
Query 118237 TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGC 118296
| ||||| || ||||| || || | || || ||| || | || | || |||
Sbjct 3841376 TCGAGGCAGTAGGCATAGGGGCGACAAGCAGAGAGTTGCGAACGCCATGTTTGGCAATCT 3841435
Query 118297 GTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356
| || | | |||||| || | | | | | | |||||| || | |
Sbjct 3841436 CGGCTTTCAAGGAGTCCCAATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATT 3841495
Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416
| || || || || || | || ||||| |||| ||||| | |||| ||| |
Sbjct 3841496 GAAGAATGCCCTGTGAGACGGGGCTGCCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGG 3841555
Query 118417 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA 118476
| | |||| | || ||| || || || || || |||||||| || || |||||
Sbjct 3841556 CGAGTTCGCAAGAGGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCA 3841615
Query 118477 -TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAG 118534
|||||| ||||||| || ||||| | || || || | || || |||| |||||
Sbjct 3841616 GTTGCCT-GGCCTCGGGAGAGTCAAAGGGAAGACG-CAGAGCAAGGAAGGCATCGGCGAG 3841673
Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCAC 118594
|||||| || || || || | || ||||||| | || |||| || ||
Sbjct 3841674 ACCTTGAACGCCCAGACCGACAGGCCGATGTCGGAAGTTGCTCTTCTTTGCTTCGGGAAC 3841733
Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654
|||||| | || ||||||| | | | ||||| || ||||| || | || | ||
Sbjct 3841734 GGGATAGTAGTTGATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTC 3841793
Query 118655 ATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 118711
|||||| | | ||| | || |||| || || || | |||| || ||
Sbjct 3841794 ATGAAGACGACCAAAGTCATATTCACCTCGAGCCTGATCCACGA---AGGTAGGGAGAGC 3841850
Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771
|| || |||||||| ||||||| | ||| || | | || | || | ||| || ||
Sbjct 3841851 GAGGGAGGCCAGATTGCACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGT 3841910
Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831
||| | |||||| || ||||| ||||||||||| || || |||| | || || ||
Sbjct 3841911 GCAGAGGTTTGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGC 3841970
Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891
||||||||||||||||| || ||||| ||||| || || | || ||| ||||| | |||
Sbjct 3841971 GTCCTTGTAAAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCA 3842030
Query 118892 GA-CATCGGCAGCTGGCACAG--TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948
| | || | || || | ||||| | || ||||| | |||||| | |||
Sbjct 3842031 TAGCTTCTG-GGCCTTAACCGTCTGGCG--ACCACGTCCCTCCTTCTCGTATCTCTCGTA 3842087
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
|| | | || || || || | | || | || || || |||| || ||||||||
Sbjct 3842088 CAGTTCCTTGAAGTCGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAA 3842147
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
||| | ||| | || ||| || || | |||||| | ||| || |||| || ||
Sbjct 3842148 GAGTGTCCACTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGC 3842207
Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
|||| | || || | | ||||| | || || || |||| | ||| ||
Sbjct 3842208 ATAGAACAAGTCGCGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAA 3842267
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG--- 119185
||| | | || |||||||| ||||| ||||| | || | | | ||| ||||
Sbjct 3842268 GTCGAAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGC-AAAGGCACCT--GGACGCTT 3842324
Query 119186 ---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242
||| |||||| || || | ||||| ||| || || |||||||| || ||||
Sbjct 3842325 GTTACCGCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAG 3842384
Query 119243 ACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGA--CATCGTGG 119300
||||| ||| |||||| ||||| |||| || |||| | | || | |
Sbjct 3842385 ACCATTGGAGGTGCCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGC 3842444
Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360
|| || | |||||||| || || ||| || || || || | ||||| || |
Sbjct 3842445 AT-TG-AGGCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCA 3842502
Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420
||||| || ||||| ||| | || | | || | ||||||| |||| |||||
Sbjct 3842503 TAGATGCCCTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGT 3842562
Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACAT 119479
||||| || || ||||| || || |||| |||||| |||| || | ||||||||
Sbjct 3842563 TGAGGTGTTCCGGCATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTC-TGGGACAT 3842621
Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539
|| ||||||||| | | || ||| || || |||||||| | | || ||
Sbjct 3842622 GAGGTTGTAGGTCTCAATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACG 3842681
Query 119540 CATAAACATGTATTGGGG 119557
||| | ||||| ||||||
Sbjct 3842682 CATGAGCATGTGTTGGGG 3842699
>seq3
Length=8560927
Score = 82.4 bits (90), Expect = 9e-11
Identities = 191/287 (67%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| ||| || | |||||| ||||||||||| || || || ||||| || ||
Sbjct 3180812 GCAAAGTCCGTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAGGCCG 3180753
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||| || ||| |||| | |||||| ||||| ||| || ||||||||||||||
Sbjct 3180752 GGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAAGATG 3180693
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTAT---CA 130192
|| || || || || |||| | |||| |||| ||| |||| | ||| |
Sbjct 3180692 CCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAA---AGCTCGACTCTTTATCTGCG 3180636
Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252
| ||| || ||||| | || || || || || |||| || | || || |||
Sbjct 3180635 ATCCATCGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGTCA 3180576
Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 130299
||||| | |||| ||| ||||| || | ||| | || |||||
Sbjct 3180575 AAGAGATATGTCTTCTCTTTGGGATCCTTCACATACGTGTCAATGAG 3180529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434550643040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |