Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 188 9e-43 seq3 82.4 9e-11 >seq4 Length=4919768 Score = 188 bits (208), Expect = 9e-43 Identities = 1115/1758 (63%), Gaps = 53/1758 (3%) Strand=Plus/Plus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 ||| ||| || || |||||||| || |||||||||||| ||||| | | |||| Sbjct 3840967 GCCATTGTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGC 3841026 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAG---GTTCATACTTTGGGAT 117944 || | | |||| | ||| || |||| | ||| | ||| | | ||||| Sbjct 3841027 ATGCTAGTGATCTTGCCCATGGTCGG---TTCCTTCAAGTGAATGTTGAGAGACTGGGAC 3841083 Query 117945 TGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTC 118003 |||||||||||| || || ||||| ||||| | | || ||| | || |||||| Sbjct 3841084 TGATCGATGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCT-GATTTC 3841142 Query 118004 CCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 118063 |||||| ||| | ||||| || || || | ||||| | ||| || ||||| || Sbjct 3841143 CCACACGGTCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGA 3841202 Query 118064 TCCACCCGCCTT-GACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTT 118119 || ||||| | | |||| ||| |||||||| | ||||| || || | | Sbjct 3841203 GCC----GCCTTCGGCTATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAA 3841258 Query 118120 TGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 118177 ||||||| || | ||| | | || || || || || || ||| || | Sbjct 3841259 CTAGATCCTTCAGCAACCATGGGT--TAACGACTTGGAATTCTCCGGCAAGGACACGGCG 3841316 Query 118178 CAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG 118236 ||| |||||||| | ||||||||| || || || || ||||| || | || || | | Sbjct 3841317 -AGAGTAGATATTTGACGTGTATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGG 3841375 Query 118237 TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGC 118296 | ||||| || ||||| || || | || || ||| || | || | || ||| Sbjct 3841376 TCGAGGCAGTAGGCATAGGGGCGACAAGCAGAGAGTTGCGAACGCCATGTTTGGCAATCT 3841435 Query 118297 GTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356 | || | | |||||| || | | | | | | |||||| || | | Sbjct 3841436 CGGCTTTCAAGGAGTCCCAATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATT 3841495 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 | || || || || || | || ||||| |||| ||||| | |||| ||| | Sbjct 3841496 GAAGAATGCCCTGTGAGACGGGGCTGCCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGG 3841555 Query 118417 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA 118476 | | |||| | || ||| || || || || || |||||||| || || ||||| Sbjct 3841556 CGAGTTCGCAAGAGGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCA 3841615 Query 118477 -TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAG 118534 |||||| ||||||| || ||||| | || || || | || || |||| ||||| Sbjct 3841616 GTTGCCT-GGCCTCGGGAGAGTCAAAGGGAAGACG-CAGAGCAAGGAAGGCATCGGCGAG 3841673 Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCAC 118594 |||||| || || || || | || ||||||| | || |||| || || Sbjct 3841674 ACCTTGAACGCCCAGACCGACAGGCCGATGTCGGAAGTTGCTCTTCTTTGCTTCGGGAAC 3841733 Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654 |||||| | || ||||||| | | | ||||| || ||||| || | || | || Sbjct 3841734 GGGATAGTAGTTGATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTC 3841793 Query 118655 ATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 118711 |||||| | | ||| | || |||| || || || | |||| || || Sbjct 3841794 ATGAAGACGACCAAAGTCATATTCACCTCGAGCCTGATCCACGA---AGGTAGGGAGAGC 3841850 Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771 || || |||||||| ||||||| | ||| || | | || | || | ||| || || Sbjct 3841851 GAGGGAGGCCAGATTGCACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGT 3841910 Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831 ||| | |||||| || ||||| ||||||||||| || || |||| | || || || Sbjct 3841911 GCAGAGGTTTGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGC 3841970 Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 ||||||||||||||||| || ||||| ||||| || || | || ||| ||||| | ||| Sbjct 3841971 GTCCTTGTAAAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCA 3842030 Query 118892 GA-CATCGGCAGCTGGCACAG--TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 | | || | || || | ||||| | || ||||| | |||||| | ||| Sbjct 3842031 TAGCTTCTG-GGCCTTAACCGTCTGGCG--ACCACGTCCCTCCTTCTCGTATCTCTCGTA 3842087 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 || | | || || || || | | || | || || || |||| || |||||||| Sbjct 3842088 CAGTTCCTTGAAGTCGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAA 3842147 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 ||| | ||| | || ||| || || | |||||| | ||| || |||| || || Sbjct 3842148 GAGTGTCCACTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGC 3842207 Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 |||| | || || | | ||||| | || || || |||| | ||| || Sbjct 3842208 ATAGAACAAGTCGCGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAA 3842267 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG--- 119185 ||| | | || |||||||| ||||| ||||| | || | | | ||| |||| Sbjct 3842268 GTCGAAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGC-AAAGGCACCT--GGACGCTT 3842324 Query 119186 ---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242 ||| |||||| || || | ||||| ||| || || |||||||| || |||| Sbjct 3842325 GTTACCGCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAG 3842384 Query 119243 ACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGA--CATCGTGG 119300 ||||| ||| |||||| ||||| |||| || |||| | | || | | Sbjct 3842385 ACCATTGGAGGTGCCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGC 3842444 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 || || | |||||||| || || ||| || || || || | ||||| || | Sbjct 3842445 AT-TG-AGGCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCA 3842502 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 ||||| || ||||| ||| | || | | || | ||||||| |||| ||||| Sbjct 3842503 TAGATGCCCTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGT 3842562 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACAT 119479 ||||| || || ||||| || || |||| |||||| |||| || | |||||||| Sbjct 3842563 TGAGGTGTTCCGGCATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTC-TGGGACAT 3842621 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 || ||||||||| | | || ||| || || |||||||| | | || || Sbjct 3842622 GAGGTTGTAGGTCTCAATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACG 3842681 Query 119540 CATAAACATGTATTGGGG 119557 ||| | ||||| |||||| Sbjct 3842682 CATGAGCATGTGTTGGGG 3842699 >seq3 Length=8560927 Score = 82.4 bits (90), Expect = 9e-11 Identities = 191/287 (67%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| ||| || | |||||| ||||||||||| || || || ||||| || || Sbjct 3180812 GCAAAGTCCGTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAGGCCG 3180753 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| || ||| |||| | |||||| ||||| ||| || |||||||||||||| Sbjct 3180752 GGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAAGATG 3180693 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTAT---CA 130192 || || || || || |||| | |||| |||| ||| |||| | ||| | Sbjct 3180692 CCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAA---AGCTCGACTCTTTATCTGCG 3180636 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| || ||||| | || || || || || |||| || | || || ||| Sbjct 3180635 ATCCATCGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGTCA 3180576 Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 130299 ||||| | |||| ||| ||||| || | ||| | || ||||| Sbjct 3180575 AAGAGATATGTCTTCTCTTTGGGATCCTTCACATACGTGTCAATGAG 3180529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434550643040