Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 185 1e-41 seq3 134 2e-26 >seq4 Length=4919768 Score = 185 bits (204), Expect = 1e-41 Identities = 570/871 (65%), Gaps = 17/871 (2%) Strand=Plus/Minus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| ||||||| ||||| | ||||||||||| || ||| |||| | | |||| Sbjct 3842692 ACATGCTCATGCGTGTGGCAGTTGGTATTCATGGCGACGACGTTGAAAAGGCTATTGAGA 3842633 Query 104289 CATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTTCAATGCT 104347 | ||| || |||||||| | || |||| ||||| |||| || || |||||||| Sbjct 3842632 CCTACAACCTCATGTCCCA-GAAGTGCTTCACCCACGCTTCACCCACGCTGTTCAATGCC 3842574 Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 || ||||| ||| || ||||| |||||| | || | || || || ||| ||| Sbjct 3842573 GGAACACCTCAACCTCAGCTGTCCTCCTGCTTCTTGATAGACATGAAAGAAGACAGCATC 3842514 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467 | || ||||||| ||||| | | ||||| || || ||| || || |||||| Sbjct 3842513 GAGGGCATCTATGACACTCTCAAGACTTGTGCCATGATTTCCAAGACTGCCGGAGGTATT 3842454 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527 || | | |||| | | |||| ||| |||| ||||| ||||| Sbjct 3842453 GGCCTCAATGCCCATTGCATTCGTGCCACAGGATCCTATATTGCAGGGACCAATGGCACC 3842394 Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587 || ||||| | || || ||||||||||| || ||| || || ||||| || | || Sbjct 3842393 TCCAATGGTCTCATCCCCATGCTTCGCGTCTTCAACAATACTGCTCGCTACGTCGACCAG 3842334 Query 104588 GCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 104641 | || ||||| | || | | || |||| || || ||||||||||| || Sbjct 3842333 GGCGGTAACAAGCGTCCA---GGTGCCTTTGCCATCTACCTCGAACCATGGCACGCAGAC 3842277 Query 104642 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGA 104700 | | || ||| | | |||| ||||| || | || |||| | | || ||||| Sbjct 3842276 GTTTTCGACTTCTTGAACCTGCGAAAGAACCACGGCAAGGAAGAGGT-CAGAGCACGCGA 3842218 Query 104701 TCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAA 104760 | |||| || || |||| ||| || | |||||| | | || ||| ||| | Sbjct 3842217 CTTGTTCTATGCCCTGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGAACCAAGA 3842158 Query 104761 TTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTT 104820 ||| | ||||| || || | |||| |||||||| | || | | || || || || Sbjct 3842157 GTGGACACTCTTCTGCCCTCATGAGGCCCCTGGTCTAGCTGACGTCTATGGCGACGACTT 3842098 Query 104821 TGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC-GACGGTGCCAGCTG 104879 | | || ||| | |||||| | || || || | | | | |||||| || Sbjct 3842097 CAAGGAACTGTACGAGAGATACGAGAAGGAGGGACGTG-GTCGCCAGACGGTTAAGGCC- 3842040 Query 104880 CCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTT 104938 | || | | ||| | ||||| ||| || | || ||||||||||| || || ||||||||| Sbjct 3842039 CAGAAGCTATGGTATGCTATCCTCGAGGCACAGACCGAGACTGGGACCCCCTACATGCTT 3841980 Query 104939 TACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCC 104998 ||||| |||||||| || |||||| || || ||||| |||||| ||| || || Sbjct 3841979 TACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAACTTGGGTACCATCCGAAGCTCA 3841920 Query 104999 AATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTC 105058 || ||||| || || || | |||||||||| || ||| |||||||| || || Sbjct 3841919 AACCTCTGCACCGAGATTGTCGAATTTACAGCTCCTGACGAGGTCGCTGTGTGCAATCTG 3841860 Query 105059 GCATCAATCGCTCTCCCCAAGTATGTGGATC 105089 || || |||||||||| | | ||||||| Sbjct 3841859 GCCTCCCTCGCTCTCCCTACCTTCGTGGATC 3841829 >seq3 Length=8560927 Score = 134 bits (148), Expect = 2e-26 Identities = 206/287 (72%), Gaps = 10/287 (3%) Strand=Plus/Plus Query 94656 GGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCT 94715 ||||| ||||| ||||| |||| |||| | |||||| ||||||| | || Sbjct 3180513 GGAGATGTACAGCCTTCTCATTGACACGTATGTGAAGGATCCCAAAGAGAAGACATATCT 3180572 Query 94716 CTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTG 94775 |||||| ||||| | ||| | || || |||| |||||||| || |||||| || || Sbjct 3180573 CTTTGACGCCATTGACACAATCCCATGCATTCGCAAGAAAGCAGACTGGGCTTTGCGATG 3180632 Query 94776 GTTTG---ATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 | | | ||| | ||||| | |||||| |||| | | || ||||| || || Sbjct 3180633 GATCGCAGATAAAGAGTCGAG---CTTTGCCCAGCGGTTAGTTGCTTTTGCAGCCGTCGA 3180689 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGA-GGTCTC 94890 || |||||||||||||| ||||| ||| || || | ||||||||| ||| | || || Sbjct 3180690 AGGCATCTTCTTCTCTGGATCCTT-TGCAGCGATCTTCTGGCTCAAG-AGCAAGGGCCTG 3180747 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 ||||| || ||| |||||||||||||||||||| ||||| ||||| Sbjct 3180748 ATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTCCCGTGATGAGGG 3180794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260187576160