Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq3 221 4e-52
seq6 187 8e-42
seq17 87.8 5e-12
seq9 84.2 7e-11
>seq3
Length=8560927
Score = 221 bits (244), Expect = 4e-52
Identities = 492/735 (67%), Gaps = 9/735 (1%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || |||||||| || ||||| || || || || | ||| | | | || ||
Sbjct 1083556 GCAATTGGCATCGATTTGGGCACTACCTACTCATGCGTGGGTGTCTTCCGGGACGACCGC 1083497
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|||| || || || ||||| || || ||| |||| || || || | |||||| || |||
Sbjct 1083496 ATAGAGATCATCGCCAATGACCAGGGCAACCGAACCACCCCCTCGTTCGTTGCTTTCACC 1083437
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| ||||||||| | ||||||||| | || || || || | || || || | ||
Sbjct 1083436 GACACTGAGCGTCTCATTGGTGATGCCGCGAAGAACCAGGTCGCCATGAACCCCCACAAC 1083377
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACA---AATCTACACAA 349435
|| || || || || |||||||| || ||| | | || ||| || | |||
Sbjct 1083376 ACCGTCTTCGACGCCAAGCGACTGATCGGTCGTAAATTCAGCGACCCCGAAGTT---CAA 1083320
Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495
| ||| | || || || || || | || | | | ||| |||| || || | ||
Sbjct 1083319 GCCGATATGAAGCACTTCCCATTCAAGGTCAT-CGACAAG--GGTGGCAAGCCGGTCATC 1083263
Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555
|||| || | ||||||||| | || || || ||| |||||||| || || |||||
Sbjct 1083262 CAGGTGGAGTTCAAAGGTGAAGAGAAGCAGTTCACACCAGAAGAAATCTCGTCCATGGTC 1083203
Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615
|| || |||| |||| ||| || |||| | |||| ||||| | | || ||
Sbjct 1083202 TTGACCAAGATGAGAGAAACTGCGGAGTCATACCTCGGTGGCACAGTCAACAACGCAGTC 1083143
Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675
|| || || || |||||||| || || | || || || || || ||||||||
Sbjct 1083142 ATCACCGTGCCTGCCTATTTCAACGACTCTCAACGCCAAGCCACCAAGGATGCTGGTCTG 1083083
Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735
||||| || | || || || | || || || |||||||||||||| || ||||| ||
Sbjct 1083082 ATTGCCGGCCTCAACGTCCTTCGTATCATCAACGAACCCACTGCTGCCGCCATTGCCTAC 1083023
Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795
|| || || || | | ||| || ||| | || || || ||| | ||||||||
Sbjct 1083022 GGTCTCGACAAGAAGGCTGAAGGCGAGCGCAATGTCCTCATCTTCGATCTCGGTGGTGGC 1082963
Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855
||||| ||||| || || | || |||| ||||| || || ||||| || | ||||||
Sbjct 1082962 ACTTTCGATGTTTCTCTCTTGACTATTGAGGAGGGTATCTTCGAAGTCAAGTCCACTGCT 1082903
Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915
|| || || ||||| ||||| || || || || || ||||| || || ||||| ||
Sbjct 1082902 GGCGACACTCATCTGGGTGGTGAGGACTTCGACAACCGTCTTGTCAACCACTTTGTGAAT 1082843
Query 349916 GAATTTAAGCGTCAA 349930
|| || || ||| ||
Sbjct 1082842 GAGTTCAAACGTAAA 1082828
>seq6
Length=1908156
Score = 187 bits (206), Expect = 8e-42
Identities = 737/1136 (65%), Gaps = 45/1136 (4%)
Strand=Plus/Plus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| ||||| || || | |||||| | | ||| ||||||||| | || || ||||| |
Sbjct 1119963 CCTGAAGAGATCTCCGCCATGGTTCTTGGTAAGATGAAGGAAGTCGCGGAGGCATACCTT 1120022
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| | | ||| || | || ||| | || || ||||| ||||| ||||| ||||||||
Sbjct 1120023 GGCAAGAAAGTCACCCACGCAGTTGTCACCGTCCCAGCATATTTCAATGACGCCCAGCGA 1120082
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || |||||||||| ||||| || || | |||||| | | | || ||
Sbjct 1120083 CAAGCCACCAAGGATGCTGGCACAATTGCCGGTTTGACTGTTCTGCGTGTTGTCAACGAG 1120142
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
|| ||||| ||||| || || || || || ||||| | | | | |||| | | ||
Sbjct 1120143 CCTACTGCCGCAGCTATCGCCTACGGTCTCGATAAGAAGGG---CAAAGAGAGTCAAATC 1120199
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831
|| ||| ||| | |||||||| ||||||||||| || || || | ||||||| ||
Sbjct 1120200 ATTGTTTACGATCTTGGTGGTGGGACTTTTGATGTTTCCCTTCTTTCGATTGAAGATGGC 1120259
Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891
| || || ||| || || |||||||| || ||||||||||| ||||| || || |
Sbjct 1120260 GTCTTCGAGGTTTTGGCTACCGCTGGTGACACTCATCTTGGTGGCGAAGACTTCGACCAG 1120319
Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAA----ATTGATATTGG 349947
|| | | ||||||| || |||| || |||| || | ||| || |
Sbjct 1120320 CGAGTGATCGACTATTTTGTGAAGAAATTCAA----CAAGGAGAACGATGTCGATGTTCG 1120375
Query 349948 AGATAATC-CTAGAGCAATGCGTCGCCTAAGAACTGCG-TGT-GAACGTGCTAAGCGTTC 350004
| | | | ||| | ||| || || ||| ||| || || || |||||||| |
Sbjct 1120376 CAAGGACCTCAAGA-CTATGGGTAAGCT--GAAGCGCGAAGTCGAGCGAGCTAAGCGAAC 1120432
Query 350005 CTTATCATCT--ACTACCCAAACCTC-TATTGAAATTGATTCTCTTGCTGATGGCAAAGA 350061
| || ||| | | | | ||| |||||||| || || | |||| || ||
Sbjct 1120433 TCTCTCTTCTCAAATGTCGA---CTCGAATTGAAATCGAAGCTTTCCACAATGGAAAGGA 1120489
Query 350062 TTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGC 350121
|||| | | | || || || ||| || ||||| |||||| || || | ||
Sbjct 1120490 CTTCTCTGAGACCTTGACCCGAGCCAAGTTCGAGGAATTGAATATGGACCTGTTCA-AGA 1120548
Query 350122 A-ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATC--AGAT 350178
| || | | || || ||| |||| || ||||| || || ||| | ||||| ||||
Sbjct 1120549 AGACGCTCAAGCCGGTCGAACAAGTTTTGAAAGACGC--CAAGGTCAAGAAATCCGAGAT 1120606
Query 350179 TGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACT-AT 350237
|||||| | || | ||||||||||||| ||||| || || ||| |||| | | ||
Sbjct 1120607 TGATGACATTGTCCTCATTGGTGGTTCTACCCGTATCCCCAAGGTT---CAGTCAATGAT 1120663
Query 350238 C--TGAGTTTTTTAATGGCAAAGAA--CCTTCTAGATCAATTAATCCAGATGAAGCTGTT 350293
| || || ||| |||| ||||| | | || || || || || |||||||||
Sbjct 1120664 CGAAGAATTCTTTGGTGGC-AAGAAGGCAAGCAAG-GGTATCAACCCGGACGAAGCTGTT 1120721
Query 350294 GCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGAT 350353
|||||||| || || ||||||| | | | || || ||| | | ||
Sbjct 1120722 GCATATGGCGCAGCCGTTCAGGGTGGTGTCCTTTCCGG-----CGAG-ACCGGCACCGAA 1120775
Query 350354 GATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTA 350413
|| || | || | ||||| | ||| ||| | ||||| | |||||| | |||| |||
Sbjct 1120776 GACCTCATTCTCATGGATGTCAATCCTCTTACTCTTGGCATCGAAACTACCGGTGGAGTC 1120835
Query 350414 ATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCT 350473
||||| || ||||| |||| | | || || || || || || |||| || |
Sbjct 1120836 ATGACCAAGCTCATTCCCCGAAACACTCTCGTCCCGACCAAGAAATCTCAAATCTTCAGT 1120895
Query 350474 ACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGC 350533
|| || || || ||||| | ||| |||||||| || ||||| ||||| ||
Sbjct 1120896 ACGGCAGCCGACAACCAGCCCGTGGTGTTGATTCAAGTTTTCGAAGGCGAACGAGCAATG 1120955
Query 350534 ACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGA 350593
|| || || || || || || ||||| || | || ||||| || ||| |
Sbjct 1120956 ACAAAGGACAACAACCTCCTAGGCAAATTTGAACTCACTGGTATTCCTCCGGCTCCTCGT 1121015
Query 350594 GGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGT 350649
|| || |||||||| ||||| || ||||| | || |||| |||||| | || ||
Sbjct 1121016 GGTGTCCCTCAGATCGAAGTGTCCTTCGAACTCGACGCAAACGGTATTCTCAAGGT 1121071
>seq17
Length=207847
Score = 87.8 bits (96), Expect = 5e-12
Identities = 174/258 (67%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 378250 GTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCA 378309
|| || || |||||||| || | ||| | |||||| |||| || || ||||| || ||
Sbjct 155132 GTCTTGACAGCAGTATCGATAAGACCCTCGCGACCAGCCATGGCGTGAAAGAAGAACTCT 155073
Query 378310 GTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCA 378369
|| || || | |||| | | | || |||||| || ||||| | | || | |
Sbjct 155072 GTGGGGGTCAAGCCACGCAGATAGGAGTTCTCAACGAAGCCTCTCGAAGGAGCGGAGTAA 155013
Query 378370 TCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCA 378429
|| | |||| |||| || | ||| || | | || ||| | ||||| ||||| ||
Sbjct 155012 TCGTCCTTTGCGAAATGGGGCAGTGTGCGGTATTTGAAGCCAAAAGGAATACGTTTGCCT 154953
Query 378430 TCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGCAATATTTAAATCACTACCTTTA 378489
|| ||| ||||||||||| || | ||||||||||||||| | | | ||||||
Sbjct 154952 TCCACAGCCTGTTGACCAACGATAGCAGTCATTTGAGCAATATTGATAGTAGAACCTTTT 154893
Query 378490 GACCCAGCATTAACCATA 378507
|| || ||| | |||||
Sbjct 154892 GAGCCTGCACGAGCCATA 154875
>seq9
Length=3042725
Score = 84.2 bits (92), Expect = 7e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588
|| || || ||||| || || || || ||||| || || || | || || || ||||||
Sbjct 1318721 ACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCGTCTTCA 1318780
Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATC 140644
||||| || ||||| ||||| || || ||||| || |||||||| ||||| || ||
Sbjct 1318781 AGTTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCTTCCTTGTC 1318836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515252769207452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |