Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq4 212 7e-50
seq3 156 5e-33
seq9 138 1e-27
seq7 98.7 1e-15
>seq4
Length=4919768
Score = 212 bits (234), Expect = 7e-50
Identities = 563/853 (66%), Gaps = 13/853 (2%)
Strand=Plus/Plus
Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964
||||| |||||||||||||| || ||||| |||| | ||||||| ||||| || || |||
Sbjct 3841852 AGGGAGGCCAGATTGCACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGTG 3841911
Query 80965 CACAAATTAGAAGACTTA--ATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAG 81022
|| | || || ||| || ||||||| ||| |||||||| ||| ||||| |
Sbjct 3841912 CAGAGGTTTGAG--CTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGG 3841969
Query 81023 CGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCC 81082
|||||||||| |||||| ||||| || |||||| ||||| || |||||| || | ||
Sbjct 3841970 CGTCCTTGTAAAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACC 3842029
Query 81083 AAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAG 81142
| | || | ||||| ||| || ||| || || | | || | ||||
Sbjct 3842030 ATAGCTTCTGGGCCTTAACCGTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACA 3842089
Query 81143 CTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202
||| | ||| | | | || | | |||| || | ||| ||| | |||||| | |
Sbjct 3842090 GTTCCTTGAAGTCGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGA 3842149
Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262
| ||| || || ||||| ||| | |||||| |||||| |||| |||||
Sbjct 3842150 GTGTCCACTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCAT 3842209
Query 81263 TGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGT 81322
||||| |||||| | |||| || | || ||||| |||| | | ||||
Sbjct 3842210 AGAACAAGTCGCGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGT 3842269
Query 81323 CCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTG-CGACGG--- 81378
| | | ||| || |||||||| || || || | ||| | | | ||| | || |
Sbjct 3842270 CGAAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGC-AAAGGCACCTGGACGCTTGTTA 3842328
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
|| ||||||| |||||| || ||||| ||| || || || | ||| ||||||| ||||
Sbjct 3842329 CCGCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCA 3842388
Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTG 81496
| || || || || || | ||| || || |||| || | | || ||||
Sbjct 3842389 TTGGAGGTGCCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTG 3842448
Query 81497 AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAA 81556
|| || || || || | ||| |||||| ||||| || | || ||||| |
Sbjct 3842449 --AGGCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGA 3842506
Query 81557 TTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTT 81616
| ||||||||||| |||| ||||||||| | |||||| ||| |||| ||||||
Sbjct 3842507 TGCCCTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAG 3842566
Query 81617 TTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGT 81676
|| |||||||||||||| || || | ||||| |||| | | ||||| ||||
Sbjct 3842567 GTGTTCCGGCATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGT 3842626
Query 81677 CATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736
||||| || | | | || ||||| || |||||||| | || |||||||| |
Sbjct 3842627 TGTAGGTCTCAATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGA 3842686
Query 81737 ACATGTACTGGGG 81749
||||| |||||
Sbjct 3842687 GCATGTGTTGGGG 3842699
Score = 82.4 bits (90), Expect = 9e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||||||||||||||| |||||||| ||| | ||||| || | ||||| |
Sbjct 3840973 GTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGCTA 3841032
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
||| ||| | | || || | || || | ||||| |||||||| |||||| ||||
Sbjct 3841033 GTGATCTTGCCCATGGTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGATG 3841092
Query 80158 AAAGCCCCACGATCTGCCGCCATTT 80182
|| || || || || || |||||||
Sbjct 3841093 AAGGCACCGCGGTCCGCTGCCATTT 3841117
>seq3
Length=8560927
Score = 156 bits (172), Expect = 5e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || || | || |||||||| || ||||||||||| ||||| |
Sbjct 4895550 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 4895491
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || || |||||||| ||||| |||||||| ||||||
Sbjct 4895490 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGACCAG 4895431
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || ||||| || || || || |||||||||| || || || ||| ||||| ||
Sbjct 4895430 CAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGC-GACTACAA 4895372
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || || ||| | ||||| ||||||||
Sbjct 4895371 CATCCAGAAGGAGTCGACGCTGCACCTGGTCCTCCGTCTCCGCGGTGG 4895324
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || || | || || ||||| || || || || ||||||||
Sbjct 4895322 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACGATCACGCTCGAAGTTGAGTCGTCC 4895263
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| || || ||||||||||| || || || || |||||
Sbjct 4895262 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCAA 4895203
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || |||||| | ||||||| || || || | ||||||||
Sbjct 4895202 CAGCGCCTGATCTTTGCGGGCAAGCAATTGGAGGATGGCCGAACTCTCTCCGACTATAAC 4895143
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| |||||||| || || || || ||
Sbjct 4895142 ATCCAGAAGGAATCGACGCTCCACCTGGT 4895114
Score = 102 bits (112), Expect = 9e-17
Identities = 154/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || | || || ||||| ||||| || ||||| ||| || |
Sbjct 4895094 ATGCAGATCTTTGTGAAAACTTTGACGGGAAAGACGATTACGCTGGAGGTGGAG--AGCT 4895037
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | || | || | ||| || |||||||||||||| || ||||| || ||||
Sbjct 4895036 CGGACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGCATTCCGCCGGACC 4894977
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
| ||||| || || ||||| || ||||| | || || | || || || | ||||| |
Sbjct 4894976 AACAGCGCCTGATCTTTGCCGGCAAGCAGTTGGAAGACGGCCGGACGCTGTCTGACTACA 4894917
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620
| |||| ||||| |||||| || | ||||||||
Sbjct 4894916 ACATCCAGAAGGAGAGCACTCTACACTTGGTCTTGCG 4894880
>seq9
Length=3042725
Score = 138 bits (152), Expect = 1e-27
Identities = 111/134 (83%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|||||||| || |||||||| ||||||||||| || || || ||||| |||||||| ||
Sbjct 1318836 GACAAGGAAGGCATTCCTCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAACTTGAA 1318777
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | ||| ||||| | ||||| ||| |||| |||||||||||||| || || ||||||
Sbjct 1318776 GACGGTCGCACCCTCTCCGACTACAATATCCAGAAGGAATCCACTCTCCACCTGGTCTTG 1318717
Query 27619 CGTCTTCGCGGTGG 27632
|| |||||||||||
Sbjct 1318716 CGCCTTCGCGGTGG 1318703
>seq7
Length=2048283
Score = 98.7 bits (108), Expect = 1e-15
Identities = 133/183 (73%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || || || ||||| ||||| || | ||
Sbjct 21855 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGAT 21914
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| | || || ||||||||||| || || || || ||||||||||| |
Sbjct 21915 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCTT 21974
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
|| || || || ||||| || || || | ||||| || ||| ||||| || |||| |
Sbjct 21975 GATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTGAGC-GACTACAACATCCAGA 22033
Query 27593 AGG 27595
|||
Sbjct 22034 AGG 22036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309801174080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |