Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4 212 7e-50 seq3 156 5e-33 seq9 138 1e-27 seq7 98.7 1e-15 >seq4 Length=4919768 Score = 212 bits (234), Expect = 7e-50 Identities = 563/853 (66%), Gaps = 13/853 (2%) Strand=Plus/Plus Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964 ||||| |||||||||||||| || ||||| |||| | ||||||| ||||| || || ||| Sbjct 3841852 AGGGAGGCCAGATTGCACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGTG 3841911 Query 80965 CACAAATTAGAAGACTTA--ATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAG 81022 || | || || ||| || ||||||| ||| |||||||| ||| ||||| | Sbjct 3841912 CAGAGGTTTGAG--CTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGG 3841969 Query 81023 CGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCC 81082 |||||||||| |||||| ||||| || |||||| ||||| || |||||| || | || Sbjct 3841970 CGTCCTTGTAAAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACC 3842029 Query 81083 AAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAG 81142 | | || | ||||| ||| || ||| || || | | || | |||| Sbjct 3842030 ATAGCTTCTGGGCCTTAACCGTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACA 3842089 Query 81143 CTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202 ||| | ||| | | | || | | |||| || | ||| ||| | |||||| | | Sbjct 3842090 GTTCCTTGAAGTCGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGA 3842149 Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262 | ||| || || ||||| ||| | |||||| |||||| |||| ||||| Sbjct 3842150 GTGTCCACTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCAT 3842209 Query 81263 TGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGT 81322 ||||| |||||| | |||| || | || ||||| |||| | | |||| Sbjct 3842210 AGAACAAGTCGCGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGT 3842269 Query 81323 CCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTG-CGACGG--- 81378 | | | ||| || |||||||| || || || | ||| | | | ||| | || | Sbjct 3842270 CGAAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGC-AAAGGCACCTGGACGCTTGTTA 3842328 Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 || ||||||| |||||| || ||||| ||| || || || | ||| ||||||| |||| Sbjct 3842329 CCGCCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCA 3842388 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTG 81496 | || || || || || | ||| || || |||| || | | || |||| Sbjct 3842389 TTGGAGGTGCCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTG 3842448 Query 81497 AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAA 81556 || || || || || | ||| |||||| ||||| || | || ||||| | Sbjct 3842449 --AGGCCAATACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGA 3842506 Query 81557 TTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTT 81616 | ||||||||||| |||| ||||||||| | |||||| ||| |||| |||||| Sbjct 3842507 TGCCCTCGATGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAG 3842566 Query 81617 TTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGT 81676 || |||||||||||||| || || | ||||| |||| | | ||||| |||| Sbjct 3842567 GTGTTCCGGCATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGT 3842626 Query 81677 CATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736 ||||| || | | | || ||||| || |||||||| | || |||||||| | Sbjct 3842627 TGTAGGTCTCAATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGA 3842686 Query 81737 ACATGTACTGGGG 81749 ||||| ||||| Sbjct 3842687 GCATGTGTTGGGG 3842699 Score = 82.4 bits (90), Expect = 9e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||||||||||||||| |||||||| ||| | ||||| || | ||||| | Sbjct 3840973 GTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGCTA 3841032 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | || || | || || | ||||| |||||||| |||||| |||| Sbjct 3841033 GTGATCTTGCCCATGGTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGATG 3841092 Query 80158 AAAGCCCCACGATCTGCCGCCATTT 80182 || || || || || || ||||||| Sbjct 3841093 AAGGCACCGCGGTCCGCTGCCATTT 3841117 >seq3 Length=8560927 Score = 156 bits (172), Expect = 5e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || |||||||| || ||||||||||| ||||| | Sbjct 4895550 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 4895491 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || |||||||| ||||| |||||||| |||||| Sbjct 4895490 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGACCAG 4895431 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || ||||| || || || || |||||||||| || || || ||| ||||| || Sbjct 4895430 CAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGC-GACTACAA 4895372 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | ||||| |||||||| Sbjct 4895371 CATCCAGAAGGAGTCGACGCTGCACCTGGTCCTCCGTCTCCGCGGTGG 4895324 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || || ||||| || || || || |||||||| Sbjct 4895322 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACGATCACGCTCGAAGTTGAGTCGTCC 4895263 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| || || ||||||||||| || || || || ||||| Sbjct 4895262 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCAA 4895203 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || |||||| | ||||||| || || || | |||||||| Sbjct 4895202 CAGCGCCTGATCTTTGCGGGCAAGCAATTGGAGGATGGCCGAACTCTCTCCGACTATAAC 4895143 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| |||||||| || || || || || Sbjct 4895142 ATCCAGAAGGAATCGACGCTCCACCTGGT 4895114 Score = 102 bits (112), Expect = 9e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || | || || ||||| ||||| || ||||| ||| || | Sbjct 4895094 ATGCAGATCTTTGTGAAAACTTTGACGGGAAAGACGATTACGCTGGAGGTGGAG--AGCT 4895037 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||| || |||||||||||||| || ||||| || |||| Sbjct 4895036 CGGACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGCATTCCGCCGGACC 4894977 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | ||||| || || ||||| || ||||| | || || | || || || | ||||| | Sbjct 4894976 AACAGCGCCTGATCTTTGCCGGCAAGCAGTTGGAAGACGGCCGGACGCTGTCTGACTACA 4894917 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 | |||| ||||| |||||| || | |||||||| Sbjct 4894916 ACATCCAGAAGGAGAGCACTCTACACTTGGTCTTGCG 4894880 >seq9 Length=3042725 Score = 138 bits (152), Expect = 1e-27 Identities = 111/134 (83%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| || |||||||| ||||||||||| || || || ||||| |||||||| || Sbjct 1318836 GACAAGGAAGGCATTCCTCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAACTTGAA 1318777 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | ||| ||||| | ||||| ||| |||| |||||||||||||| || || |||||| Sbjct 1318776 GACGGTCGCACCCTCTCCGACTACAATATCCAGAAGGAATCCACTCTCCACCTGGTCTTG 1318717 Query 27619 CGTCTTCGCGGTGG 27632 || ||||||||||| Sbjct 1318716 CGCCTTCGCGGTGG 1318703 >seq7 Length=2048283 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || || ||||| ||||| || | || Sbjct 21855 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGAT 21914 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || ||||||||||| || || || || ||||||||||| | Sbjct 21915 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCTT 21974 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || || || ||||| || || || | ||||| || ||| ||||| || |||| | Sbjct 21975 GATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTGAGC-GACTACAACATCCAGA 22033 Query 27593 AGG 27595 ||| Sbjct 22034 AGG 22036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309801174080