Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq3 141 6e-29
seq9 91.5 9e-14
>seq3
Length=8560927
Score = 141 bits (156), Expect = 6e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | | ||||| ||||| || |||||||||||||| || ||||| || || ||
Sbjct 4894867 GCCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGA 4894926
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || ||||||| | || || |||||||| || | |||||||||||||||||
Sbjct 4894927 CAGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGG 4894986
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| || |||||||| ||| || | || ||| | || ||||| ||||||||
Sbjct 4894987 AATGCCTTCCTTGTC-CTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCA 4895045
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| |||| || ||||| || || || || ||||||||||| |||||||||
Sbjct 4895046 CCTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCATG 4895095
Score = 96.9 bits (106), Expect = 2e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
||||| ||||| || ||||| || |||||||| || || || ||||| | || ||
Sbjct 4895113 CACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTC 4895172
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
| ||| || || ||||| || | ||||||||||||||||| | || ||||||||
Sbjct 4895173 CAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTGTCCTG 4895232
Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|||| || | || ||| | || ||||| ||| ||||| | || ||||| |
Sbjct 4895233 GATC-TTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATCGTCT 4895291
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || || || |||||||| || |||||||||
Sbjct 4895292 TCCCCGTCAAGGTTTTCACGAAGATCTGCATG 4895323
>seq9
Length=3042725
Score = 91.5 bits (100), Expect = 9e-14
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537
|||| || | ||| ||||| |||| ||||||||| ||||| || || || || || |
Sbjct 1318701 CGCCACCGCGAAGGCGCAAGACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGG 1318760
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
| || || || ||||||||||||| || || || || || | ||||| |||||||| |
Sbjct 1318761 AGAGGGTGCGACCGTCTTCAAGTTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAG 1318820
Query 34598 GCACTCCCTCCTTGTCTG 34615
| | || ||||||||||
Sbjct 1318821 GAATGCCTTCCTTGTCTG 1318838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729277795572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |