Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq3 176 1e-38
seq7 134 3e-26
seq4 111 4e-19
seq9 105 2e-17
>seq3
Length=8560927
Score = 176 bits (194), Expect = 1e-38
Identities = 165/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| | ||| |||||| ||| || |||||||| || || | || |||| || |||||
Sbjct 4894885 GACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTCTTC 4894944
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| ||||||||| || ||||| ||||| |||||||| || |||| ||||||||||||||
Sbjct 4894945 CAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGAATGCCTTCCTTGTCCTG 4895004
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||||| || ||||| ||||| ||||| ||||| || ||||| || || ||||||||
Sbjct 4895005 AATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTAATCGTCTT 4895064
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| | ||| || ||||| | ||||||
Sbjct 4895065 TCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || || ||||| || || || || || ||||||||||| || | || || | ||
Sbjct 4895107 TCTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCC 4895166
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||| |||| |||||||| || ||||| ||||| |||||||| || || | ||||||||
Sbjct 4895167 ATCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTT 4895226
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||||||||| || ||||| ||||| ||||| || ||||| ||||| |||||
Sbjct 4895227 GTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGAT 4895286
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| | || || || || | ||||||
Sbjct 4895287 CGTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 4895322
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| || || || |||| |||||
Sbjct 4895339 AGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCC 4895398
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| ||||| ||||| || ||||| || ||||| ||||||| || || ||||||
Sbjct 4895399 TCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCC 4895458
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| | || ||||| |||||||| |||
Sbjct 4895459 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTC 4895518
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | || || || || | ||||||
Sbjct 4895519 TTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
>seq7
Length=2048283
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || || || | || ||||| ||||||||||| ||||||||
Sbjct 22034 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATC 21975
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| ||| || |||||||| || | |||||||||||||||||||| || || || |||
Sbjct 21974 AAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 21915
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||
Sbjct 21914 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 21856
>seq4
Length=4919768
Score = 111 bits (122), Expect = 4e-19
Identities = 194/281 (69%), Gaps = 6/281 (2%)
Strand=Plus/Plus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCT---GCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|| |||||||| |||||||||||||| ||| ||| || ||||| ||| ||||
Sbjct 3841936 CCCAAGTTCTTCTGGTTGCTCTTTCTATTGCA---GGCGTCCTTGTAAAGCATGTAGGGG 3841992
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
| || ||| | || ||| |||| || || ||| |||| |||||| || |||
Sbjct 3841993 GTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCATAGCTTCTGGGCCTTAACCGTC 3842052
Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264
| | ||| || |||||||| | | ||| || |||| ||| || ||||||
Sbjct 3842053 TGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTTGAAGTCGTCGCCATAG 3842112
Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTC 178324
|| ||| | ||||| || ||||||| ||||||||||| |||||| || | ||
Sbjct 3842113 ACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTTGGTTCTTCTCG 3842172
Query 178325 ACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| |||| |||||| | ||||| ||||| | |||||||||
Sbjct 3842173 ACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAA 3842213
>seq9
Length=3042725
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | | ||| ||||| |||||||| || || ||||| || || || | |||||
Sbjct 1318709 CGAAGGCGCAAGACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAGAGGGTG 1318768
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||| || |||||||| |||||||| ||||| || ||||| ||||||| |||
Sbjct 1318769 CGACCGTCTTCAAGTTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCT 1318828
Query 211014 TCCTTGTC 211021
||||||||
Sbjct 1318829 TCCTTGTC 1318836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150752462660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |