Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 4e-14
>seq3
Length=8560927
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || ||||| ||| || || || || || ||| || || || | || ||
Sbjct 4895342 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCCTCG 4895401
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||||||||| || || || || ||||||||||||| || | || |||||||||| |
Sbjct 4895402 AGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGG 4895461
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| ||| | | | || ||||| ||||| || || | ||||| | ||
Sbjct 4895462 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTT 4895520
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| || ||||| |||||
Sbjct 4895521 GCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| ||| || | ||| | | ||||| || ||||| || || || || ||||| ||
Sbjct 4895092 CATGCCGCCGCGTAATCTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTC 4895151
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| || ||||| | || || | || ||||||||||| || || ||||| ||||| |
Sbjct 4895152 GGAGAGAGTTCGGCCATCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGG 4895211
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232
|| | || || |||||| ||| || |||| ||| | | | ||| ||| |||||
Sbjct 4895212 CGGGATGCCTTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATCGTGTCGGACGACT 4895270
Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || | |||||| | || ||||||| ||||| || ||||| |||||
Sbjct 4895271 CAACTTCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 4895322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545160252692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |