Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 4e-14 >seq3 Length=8560927 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || ||||| ||| || || || || || ||| || || || | || || Sbjct 4895342 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCCTCG 4895401 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||||||||| || || || || ||||||||||||| || | || |||||||||| | Sbjct 4895402 AGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGG 4895461 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| ||| | | | || ||||| ||||| || || | ||||| | || Sbjct 4895462 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTT 4895520 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| ||||| || ||||| ||||| Sbjct 4895521 GCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || | ||| | | ||||| || ||||| || || || || ||||| || Sbjct 4895092 CATGCCGCCGCGTAATCTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTC 4895151 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || || ||||| | || || | || ||||||||||| || || ||||| ||||| | Sbjct 4895152 GGAGAGAGTTCGGCCATCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGG 4895211 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 || | || || |||||| ||| || |||| ||| | | | ||| ||| ||||| Sbjct 4895212 CGGGATGCCTTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATCGTGTCGGACGACT 4895270 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || | |||||| | || ||||||| ||||| || ||||| ||||| Sbjct 4895271 CAACTTCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 4895322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545160252692