Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 5e-30
seq19 118 3e-21
seq9 116 9e-21
seq7 111 4e-19
>seq3
Length=8560927
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || |||||||| || ||||| || |||| || || |||| | ||||| ||
Sbjct 4895107 TCTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCC 4895166
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||| || | ||||| || || ||||| || || |||||||| ||||| || ||||||||
Sbjct 4895167 ATCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTT 4895226
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| |||||||| ||| || ||||| ||||| || | || || || | ||||||
Sbjct 4895227 GTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGAT 4895286
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| |||||||| ||||| | ||| | |||||
Sbjct 4895287 CGTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 4895322
Score = 136 bits (150), Expect = 9e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|| ||| | ||| |||||| || || |||| ||||| || | || || | || ||
Sbjct 4894882 CAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTC 4894941
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| | |||||| || || ||||| || || |||||||| |||||||| |||||||||||
Sbjct 4894942 TTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGAATGCCTTCCTTGTC 4895001
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|| ||||| ||| || ||||| ||||| ||| | ||||| || | ||| |||||
Sbjct 4895002 CTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTAATCGT 4895061
Query 225681 CTTGCCCGTCAAAGTTTT 225698
||| ||||||||||||||
Sbjct 4895062 CTTTCCCGTCAAAGTTTT 4895079
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| ||||| ||| || || | |||||
Sbjct 4895339 AGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCC 4895398
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || ||||| || || || || |||||||| ||||| || || |||||
Sbjct 4895399 TCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCC 4895458
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || || || || | ||||| |||
Sbjct 4895459 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTC 4895518
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| ||||| | ||| | |||||
Sbjct 4895519 TTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
>seq19
Length=26846
Score = 118 bits (130), Expect = 3e-21
Identities = 188/269 (70%), Gaps = 3/269 (1%)
Strand=Plus/Minus
Query 7445 TATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAA 7504
|||||||||| || | | ||||| ||| | |||||| ||||| | | ||||
Sbjct 5039 TATATTTAATGTTCGCAGTATTTTCAGGTTTAGCAGGTACAGCTTTTTCAGTATTAATAA 4980
Query 7505 GGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACG 7564
| ||||||||| | | || ||| ||| | | | |||| ||| | || ||
Sbjct 4979 GATTAGAATTATCAGGGCCTGGTGTACAATTTATAGCAGATAAT---CAATTATATAATA 4923
Query 7565 TTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAG 7624
||| || || || ||||| | || ||||| |||||| | || ||||| | | | ||||
Sbjct 4922 GTATAATAACTGCTCATGCTATAGTGATGATCTTCTTTATGGTAATGCCAGCTTTAATAG 4863
Query 7625 GCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAA 7684
| ||||| || |||| || | || |||||||| |||| ||| |||||||| ||||| |
Sbjct 4862 GTGGTTTTGGTAATTTTTTATTACCCTTAATGATAGGTGGTCCAGATATGGCATTTCCTA 4803
Query 7685 GGCTTAACAATATAAGTTTTTGATTACTA 7713
| | || |||||||||||||||||| ||
Sbjct 4802 GATTAAATAATATAAGTTTTTGATTATTA 4774
Score = 98.7 bits (108), Expect = 2e-15
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| ||||||||||||||||| ||||||||||| || | |||||||| || || || |
Sbjct 4363 TTCTGGATGACCAAAAAATCAAAATAAATGTTGGTATAATATAGGATCACCACCACCAGC 4422
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| || ||||| |||||||||||||||||| ||||||||
Sbjct 4423 TACTTCGAAAAATGAAGTATTAAAATTTCTATCTGTTAAAAC 4464
>seq9
Length=3042725
Score = 116 bits (128), Expect = 9e-21
Identities = 103/129 (80%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || ||| ||||||||||||||||| || |||| |||||| |||| | ||
Sbjct 1318709 CGAAGGCGCAAGACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAGAGGGTG 1318768
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || ||||| || ||||| ||||||||||| || || || ||||| || ||||| |||
Sbjct 1318769 CGACCGTCTTCAAGTTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCT 1318828
Query 225613 TCCTTGTCT 225621
|||||||||
Sbjct 1318829 TCCTTGTCT 1318837
>seq7
Length=2048283
Score = 111 bits (122), Expect = 4e-19
Identities = 123/164 (75%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| ||| || ||| | || ||||| |||||||| || ||||||||
Sbjct 22034 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATC 21975
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| || || ||||| ||||| || ||||||||||| |||||||| ||| ||| |||
Sbjct 21974 AAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 21915
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||||| || | || || || | ||||| |||||||||||
Sbjct 21914 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 21871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192529916538296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |