Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4 159 5e-34 >seq4 Length=4919768 Score = 159 bits (176), Expect = 5e-34 Identities = 1164/1859 (63%), Gaps = 39/1859 (2%) Strand=Plus/Plus Query 76810 TTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGC 76869 |||| || ||||||||||| || || || || |||| ||||||| ||||||||||| Sbjct 3840971 TTGTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGC 3841030 Query 76870 TTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGA 76929 | || | ||| | || || | ||||| || | ||||| ||||||| Sbjct 3841031 TAGTGATCTTGCCCATGGTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGA 3841090 Query 76930 TGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAG 76989 |||| || || | || || ||||||| | | ||| ||| |||||||| | | Sbjct 3841091 TGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCTGATTTCCCACACGG 3841150 Query 76990 TTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCAT 77046 | || | | |||||| || | || | ||| | | || || || || || || | Sbjct 3841151 TCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGAGCCGCCTT 3841210 Query 77047 CTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAA 77106 | | ||| ||| |||||| |||| ||| ||||| | || || | | | | Sbjct 3841211 CGGCTATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAACTAGATCCTTCA 3841270 Query 77107 GGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTAC 77166 | | || ||||| | ||| |||||||| | | || | |||| ||| ||||| Sbjct 3841271 GCAACCATGGGTTAACGACTTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTG 3841330 Query 77167 TGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCA 77226 || |||||||| | | |||| ||||| || | ||| |||| || || ||||| |||| Sbjct 3841331 ACGTGTATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCA 3841390 Query 77227 TAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATT 77286 |||| || || | | | || | | |||||| | || | |||| | | | Sbjct 3841391 TAGGGGCGACAAGCAGAGAGTTGCGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGT 3841450 Query 77287 TCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC--GTT 77344 ||||||||| || || || || || | ||| | |||||||| ||||| || || Sbjct 3841451 CCCAATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTG 3841510 Query 77345 ACTAGCATATGATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAAC 77403 | | || || | ||||||||||| | ||| | || || || ||||| ||| Sbjct 3841511 AGACGGGGCTG--CCCTCGTATGTTTCATAGGTTCCCTGCTCCTTG-GCGAGTTCGCAAG 3841567 Query 77404 TCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCT 77462 || | || | | ||||| ||||| || || | |||| || | | || || Sbjct 3841568 AGGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTG-GCC 3841626 Query 77463 TCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCA 77522 || | ||||| ||| | | | | || |||||||| || | || ||||| || Sbjct 3841627 TCGGGAGAGTCAAAGGGAAGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCC 3841686 Query 77523 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTA 77582 | ||| | ||| | ||||| ||| | || ||||| |||| ||||| || || Sbjct 3841687 AGACCGACAGGCCGATGTCGGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTG 3841746 Query 77583 ATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGA 77642 || || || || || || || || | | || |||| | || || | || | | Sbjct 3841747 ATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCA 3841806 Query 77643 AAATCAAAT---CTTCCATCTATAACAAACATGTTC---AAAGCTATAGATGCTAGATTA 77696 || ||| || | || | | | | | | | | | ||| | || || ||||| Sbjct 3841807 AAGTCATATTCACCTCGAGCCTGATCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTG 3841866 Query 77697 CAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACAT 77756 || || || ||||| | || | | ||| | |||||||| || || || | | Sbjct 3841867 CACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGTGCAGAGGTTTGAGCTT 3841926 Query 77757 TTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATA 77816 ||| || |||| || | |||||||||||| ||||||| | |||||| ||||| || Sbjct 3841927 CGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATG 3841986 Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT 77876 | || ||||| || || |||||| |||| |||| | ||| | | ||| | || Sbjct 3841987 TAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCATA-GCTTCTGGGCCTT 3842045 Query 77877 ATCATAGATTTGT-ATCGCCTCTCTCTTTC----ATATTGAGTATATAGCCGTTCAAATT 77931 | | | | | | | | || ||| ||| || | ||| | || | || | Sbjct 3842046 AACC--GTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTTG--AAGT 3842101 Query 77932 CATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCAC 77991 | || || | || ||| | | |||||| |||| ||||| | | || ||| || Sbjct 3842102 CGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTT 3842161 Query 77992 CATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTC 78051 | | || || |||| ||| || | ||||| |||| || ||| || | || | Sbjct 3842162 GGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGC 3842221 Query 78052 GGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAG 78111 | | ||| ||||| || || |||||| || | | || || | || || | Sbjct 3842222 GTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTG 3842281 Query 78112 AATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTA 78171 ||||||||||| || || || || | | || || || || ||||| ||||| || | Sbjct 3842282 CGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGA 3842341 Query 78172 TATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCAT 78231 || | || || || || | || | | ||| || || | ||| || || || |||| Sbjct 3842342 CGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCAT 3842401 Query 78232 TTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGG--AT--ATCCCTATT 78287 | || || | |||||| ||| | || ||||| ||||| || | || || Sbjct 3842402 TGGTCCCTGCAATATAGGATCCTGTGGCACGAAT----GCAATGGGCATTGAGGCCAATA 3842457 Query 78288 CCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATA 78347 ||||| || |||| || || | || ||| || | || || ||||| ||||| || Sbjct 3842458 CCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATG 3842517 Query 78348 CTGTCATCCATCATGT-TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGC 78406 ||||| || |||||| || ||| || ||| |||| ||| | ||| ||||| || Sbjct 3842518 CTGTCTTCTTTCATGTCTATCAAG-AAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGC 3842576 Query 78407 ATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTC 78466 ||| || | || || || || || || || || || | || | || ||||| || || Sbjct 3842577 ATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTC 3842636 Query 78467 AATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTG 78526 |||||| ||| | ||| |||||| || || || |||||||| | ||| || || Sbjct 3842637 AATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTG 3842696 Query 78527 AGGTCTTTCAACCGTCTT-ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAA 78585 || | ||| || ||| || || || | | ||||||| | ||||| || || | Sbjct 3842697 GGGACGTTC-TGCGACTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGA 3842755 Query 78586 AACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCT 78644 | |||||||| | || ||||||| ||||| | ||| ||||||| | || |||| Sbjct 3842756 AGCCAAAATATTGATAGTTGAAGTCTCGGTCGTAGACAATTGCAGAATTGAATTCATCT 3842814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668070597760