Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4 187 4e-42 >seq4 Length=4919768 Score = 187 bits (206), Expect = 4e-42 Identities = 1302/2073 (63%), Gaps = 40/2073 (2%) Strand=Plus/Plus Query 75365 TTCTT-ATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423 ||||| ||| | |||||||| || || || || | |||| || ||||||||||| Sbjct 3840930 TTCTTGATCGACAGTGAACTGGATAGGCTGGGTGGCCGCCATTGTGCGCAGATAGTACAT 3840989 Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483 || || || || |||| ||||||| |||||||||||| || | ||| | Sbjct 3840990 GCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGCTAGTGATCTTGCCCATGGT 3841049 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 ||| || | ||||| || | ||||| ||||||||||| || || | || || Sbjct 3841050 CGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGATGAAGGCACCGCGGTCCGC 3841109 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 ||||||| | | ||| ||| |||||||| | || || | | |||||| Sbjct 3841110 TGCCATTTGCAGGACTGTCCGTTGGCTGATTTCCCACACGGTCTTATAGAGAGCTTTGAT 3841169 Query 75604 ATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 || | || | || | | || || || || ||||| || | ||| ||| |||||| Sbjct 3841170 GTCTGCGGGGATGTTGGGGATGTTCTGGATCGAGCCGCCTTCGGCTATGATTCGATTCTT 3841229 Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720 || | ||| ||||| || || | | | || | || ||||| | Sbjct 3841230 CATATTATCGGACCACAGGCCCAAGTCAACTAGATCCTTCAGCAACCATGGGTTAACGAC 3841289 Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780 ||| |||||||| | | || | |||| ||| ||||| || |||||||| | | | Sbjct 3841290 TTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTGACGTGTATGGTTCGAAACA 3841349 Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840 ||| ||||| || | ||| |||| || || ||||| |||||||| || || | | | Sbjct 3841350 TTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGACAAGCAGAGA 3841409 Query 75841 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900 || | | |||||| | || | |||| | | | ||||||||| || || || Sbjct 3841410 GTTGCGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGTCCCAATCCCACAGGTCCGA 3841469 Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGAT-CCATTAT 75959 || || | ||| | |||||||| ||||| || | | || | | || | | Sbjct 3841470 GGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCT-GTGAGACGGGGCTGCCCTCGT 3841528 Query 75960 ATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAAT 76019 ||||||| || || || | || | || ||||||||| || | ||| | | | Sbjct 3841529 ATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAGTGAGAGCAGCATGGT 3841588 Query 76020 AAATTGTTTCGAAAATCTTCTTATTAAGAT-CTTGCGCTTCAAGACTATCAAAAGGATAA 76078 |||| ||||| || || | |||| || | | || || || || ||||| ||| | Sbjct 3841589 AAATGGTTTCAAAGATTTGAATATTCAGTTGCCTG-GCCTCGGGAGAGTCAAAGGGAAGA 3841647 Query 76079 TGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTC 76138 | | | || || ||||| || || || ||||| || | ||| | ||| | ||||| Sbjct 3841648 CGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACAGGCCGATGTCGG 3841707 Query 76139 TTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGA 76198 ||| | | ||||| |||| || || || || ||||| || || || || || Sbjct 3841708 AAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTGATATCGATGATCTTGTTTAGG 3841767 Query 76199 TTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCAT----C 76254 || | || |||| | || || | || ||| ||| ||| || | Sbjct 3841768 TTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCAAAGTCATATTCACCTCGAGCC 3841827 Query 76255 T-ATC-ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312 | ||| || || || ||||| | || || ||||| || || || ||||| | || | Sbjct 3841828 TGATCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTGCACACAGCGACCTCGTCAGGA 3841887 Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTT--GATAGTTCCAAGATTTT 76370 | | ||| | ||||| ||||| || || | ||| ||| || || | || | Sbjct 3841888 GCTGTAAATTCGACAATCTCGGTGCAGAGGTT--TGAGCTTCGGATGGTACCCAAGTTCT 3841945 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 |||||||||||| | || || | |||||| ||||| | | || || ||||| || Sbjct 3841946 TCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTAGGGGGTCCCAGTCTCGG 3842005 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGT-ATCGC 76489 |||||| |||| |||| | ||| | | ||| | ||| | | | | | | | Sbjct 3842006 TCTGTGCCTCGAGGATAGCATACCATA-GCTTCTGGGCCTTA--ACCGTCTGGCGACCAC 3842062 Query 76490 TTCTCTCTTTCATATTGTGTATATAACCGTTCA---AATTCATCTCCCCAAACATCATCC 76546 || ||| ||| | | | | | || |||| || || || || | || ||| | Sbjct 3842063 GTCCCTCCTTC-TCGTATCTCTCGTACAGTTCCTTGAAGTCGTCGCCATAGACGTCAGCT 3842121 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 | |||||| |||| || || | | || |||||| | | || || |||| | Sbjct 3842122 AGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTTGGTTCTTCTCGACACGTTCC 3842181 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 || || | ||||| |||| || ||| || | || || | ||| ||||| || Sbjct 3842182 ATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCTCTGACCTCTTCCTTG 3842241 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || |||||| || | | ||| || | || || | ||||||||||| || || Sbjct 3842242 CCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGCCATGGTTCGAGGTAG 3842301 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 || || | |||| || || || ||||| ||||| || | || | ||||| || || Sbjct 3842302 ATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGTAGCGAGCAGTATTGTTG 3842361 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 | || | | ||| || || | || || || || ||||| || || | |||||| | Sbjct 3842362 AAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTCCCTGCAATATAGGAT 3842421 Query 76847 CCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTA 76904 || |||||||| | | || || |||| || ||||| || | || || || | Sbjct 3842422 CCTGTGGCACGAATGCAATGGGCATTGA--GGCCAATACCTCCGGCAGTCTTGGAAATCA 3842479 Query 76905 GAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT-TAAGA 76963 ||||| || | ||||||||||||||||| || || || || |||||| || | Sbjct 3842480 TGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATGCTGTCTTCTTTCATGTCTATCA 3842539 Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023 || || ||| |||| ||| | ||| ||||| ||||| |||| || || || || Sbjct 3842540 AG-AAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAACAGCGTGGGTGAAGCG 3842598 Query 77024 TGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCAT 77083 || ||||| || || | || | || ||||| || |||||| | ||| | || Sbjct 3842599 TGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCAATAGCCTTTTCAACGTCGTCG 3842658 Query 77084 TGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTT-ATT 77142 |||||| || || || |||||||| | ||| || || || |||||| | | ||| || Sbjct 3842659 CCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGACGTTCTGC-GACTTGCTT 3842717 Query 77143 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 77202 || || | | ||||||| | ||||| || || || |||||||| | || || Sbjct 3842718 CCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAAGCCAAAATATTGATAGTTGAA 3842777 Query 77203 GTCTCTTTCGTAAATAATAACCGAATTTAGTT--TGTCCTTATATTTGGTAACAAT-ATC 77259 ||||| ||||| | ||| | ||||| | || | | | | | | | ||| | | Sbjct 3842778 GTCTCGGTCGTAGACAATTGCAGAATTGAATTCATCTGCGTGTCTCATGACACAGTCGTA 3842837 Query 77260 CATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAA 77319 | | | || || || || || || | | |||||||||||||||||| | Sbjct 3842838 CGTCTCCTTG---GAGATCATGGGGGAGGGCCTGTTGTTTTTAGGATTAACATAGAAGTA 3842894 Query 77320 TAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGC 77379 | ||| | | ||| | ||| | || || |||| |||||| || ||||| || || Sbjct 3842895 GAGGTCGGCGACGACGGAGGAAAACTGCTTCTTGGTTTGCTTGTGAAGGTTCGAAACAGC 3842954 Query 77380 TATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || | || || || | ||||||||| ||||| Sbjct 3842955 AATACGCGCTGCGAGGACTGCATAGTCGGGATG 3842987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933651418880