Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 8e-15
seq7 95.1 3e-14
seq4 84.2 5e-11
>seq3
Length=8560927
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||| || ||||||||||| || | | || | || ||||| |
Sbjct 4894888 CAAG-TGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCCA 4894946
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| ||||| ||||| || | ||| ||||||| || || |||||||| || ||||
Sbjct 4894947 ACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGAATGCCTTCCTTGTCCTGAA 4895006
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | |||| || ||||| || || || ||||| || || |
Sbjct 4895007 TCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTAATCGTCTTTC 4895066
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| | ||| ||||| |||| ||||||
Sbjct 4895067 CCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
Score = 96.9 bits (106), Expect = 8e-15
Identities = 155/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || || || ||||| || ||||||||||| ||| | || |
Sbjct 4895332 GAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCG 4895391
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || ||| |||||||| || || | ||||||||| | | || || ||
Sbjct 4895392 GCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTC 4895451
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGA 152063
|| || || || || ||||| | || | | ||| ||| | ||| || ||||||
Sbjct 4895452 TTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGA--CTCGACCTCAAGA 4895509
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || | || |||||||||| ||||||
Sbjct 4895510 GTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
>seq7
Length=2048283
Score = 95.1 bits (104), Expect = 3e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| ||| | ||| | || ||||| || || |||||||||||
Sbjct 22034 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATC 21975
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
| | ||||||||| | || ||| |||||||| || || || || |||||| | ||
Sbjct 21974 AAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 21915
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| |||| || ||| || || || || || || ||||||||||| ||||| ||||||
Sbjct 21914 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 21855
>seq4
Length=4919768
Score = 84.2 bits (92), Expect = 5e-11
Identities = 189/283 (67%), Gaps = 6/283 (2%)
Strand=Plus/Minus
Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688
||||||||| | ||||| |||| | || ||| | || ||| || ||| | ||||
Sbjct 3842213 TTCTATGCCCTGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGAACCAAGAGTGG 3842154
Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748
| ||||| || || |||| ||||||||||| | ||| || ||||| || || ||
Sbjct 3842153 ACACTCTTCTGCCCTCATGAGGCCCCTGGTCTAGCTGACGTCTATGGCGACGACTTCAAG 3842094
Query 115749 AATCTTTACGAAAGGTACGAGAAAGAGGGAAGAG---CCAAAAGGGTTGTGAAGGCGCAA 115805
| || ||||| || |||||||| |||||| | | | | | |||| ||||| ||
Sbjct 3842093 GAACTGTACGAGAGATACGAGAAGGAGGGACGTGGTCGCCAGACGGTT---AAGGCCCAG 3842037
Query 115806 GACCTTTGGCATCATATCCTTGTCACACAGTCAGAGGTCGGAATGCCCTTTATTGCGTAC 115865
| || ||| || |||||| | ||||| | ||| || | |||| || |||
Sbjct 3842036 AAGCTATGGTATGCTATCCTCGAGGCACAGACCGAGACTGGGACCCCCTACATGCTTTAC 3841977
Query 115866 AAAGATGCAGTTTGTCGAAAGAGCAATCAAAAGAATTTCGGTA 115908
|| || || | |||||||||| || ||||| || ||||
Sbjct 3841976 AAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAACTTGGGTA 3841934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153819558200364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |