Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq3 168 1e-36
seq7 129 1e-24
>seq3
Length=8560927
Score = 168 bits (186), Expect = 1e-36
Identities = 178/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||||| || | |||| |||| ||||| || || ||||||||||||||||
Sbjct 4894868 CCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 4894927
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| ||||| || || | || || ||||||||||||| || |||||||| ||||
Sbjct 4894928 AGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGA 4894987
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050
|| || |||||||| || ||| ||||| || ||| | ||||| ||||||| |||| || |
Sbjct 4894988 ATGCCTTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCGATCGTGTCCG-AGCTCTCCA 4895045
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || || |||||||| ||||||||||| || || || ||||||||
Sbjct 4895046 CCTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
Score = 165 bits (182), Expect = 2e-35
Identities = 166/213 (78%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947
|| ||||| || | ||| ||| || |||||||| ||||| | || || |||||||||
Sbjct 4895111 AGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCC 4895170
Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007
|| | ||| || || |||||||||| || |||||||| ||| || || ||||||||
Sbjct 4895171 TCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTGTCC 4895230
Query 283008 TGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066
|||||| ||||| || ||| | ||||| ||||| || | || |||||||| ||||||||
Sbjct 4895231 TGGATC-TTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATCGT 4895289
Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| |||||||| || || ||||| ||||||||
Sbjct 4895290 CTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 4895322
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || ||||| || | ||| || || ||||||||||||||
Sbjct 4895324 CCACCGCGGAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 4895383
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| ||||||||||| || ||||| ||||| || || | || || ||||| |||
Sbjct 4895384 AGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGA 4895443
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||| ||||| |||||||| | || ||| | ||||| ||||| | |||||
Sbjct 4895444 ATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACC 4895503
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||| || ||||| || || ||||| ||||||||
Sbjct 4895504 TCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
>seq7
Length=2048283
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || || ||||| || || || || || ||||| ||||||
Sbjct 22034 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATC 21975
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || || |||||| ||| || || |||||||| |||||||| | || || | |||
Sbjct 21974 AAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 21915
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || | ||||| ||||| ||||| ||||| ||||| | ||||| |||||
Sbjct 21914 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 21856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738073446936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |