Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 2e-30
seq9 123 2e-23
seq7 104 2e-17
>seq3
Length=8560927
Score = 147 bits (162), Expect = 2e-30
Identities = 177/234 (76%), Gaps = 10/234 (4%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || | || || |||| || || |||||||||||||| ||||| ||||| ||
Sbjct 4894867 GCCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGA 4894926
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || |||| || | |||||||||||| || ||||||||||||||||||| ||
Sbjct 4894927 CAGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGG 4894986
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTC---GCTCGAC 41809
|| || ||||||||| ||| | ||||| | ||| | | | ||||| ||| |
Sbjct 4894987 AATGCCTTCCTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCT---C 4895041
Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||||||| ||| ||||| || ||||||| || || || || |||||||||
Sbjct 4895042 TCCACCTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCATG 4895095
Score = 147 bits (162), Expect = 2e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||||| | | |||||| || ||||| |||||||| ||||||||||||||
Sbjct 4895095 GCCGCCGCGTAATCTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGA 4895154
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| || || | || || | |||||||| || || ||||||||||||||||||| ||
Sbjct 4895155 GAGAGTTCGGCCATCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGG 4895214
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || ||||||||| ||| || ||| ||| | | | |||||| |||||| |
Sbjct 4895215 GATGCCTTCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATCGTGTCGGACGACTCAA 4895273
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || | ||| ||||| || ||||||| || || ||||| |||||||||
Sbjct 4895274 CTTCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCATG 4895323
Score = 141 bits (156), Expect = 9e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | ||||| |||||||| ||||||||| ||||| ||||||
Sbjct 4895323 GCCACCGCGGAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 4895382
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || |||||||| ||||||||||| || |||||||| ||||| | ||
Sbjct 4895383 CAGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGG 4895442
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| || ||| |||||| ||| || ||| ||| | | | |||||||| ||||| |
Sbjct 4895443 AATGCCCTCTTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGCTGGACTCGA 4895501
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || || |||| || || ||||| |||||||||
Sbjct 4895502 CCTCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCATG 4895551
>seq9
Length=3042725
Score = 123 bits (136), Expect = 2e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| ||||| || || || ||||| || || ||| |||||||| || || |||||||
Sbjct 1318701 CGCCACCGCGAAGGCGCAAGACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGG 1318760
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
|||||||||| |||| || || |||||||| ||||| ||||||||||| ||||||| |
Sbjct 1318761 AGAGGGTGCGACCGTCTTCAAGTTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAG 1318820
Query 41754 GAACGCTCTCCTTGTC 41769
||| || ||||||||
Sbjct 1318821 GAATGCCTTCCTTGTC 1318836
>seq7
Length=2048283
Score = 104 bits (114), Expect = 2e-17
Identities = 134/183 (73%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| || || || |||| || ||||||||||||||||| |
Sbjct 22036 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGA 21977
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
||| |||||| ||||| | || | || ||||||||| ||| || ||| || |
Sbjct 21976 TCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 21917
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | |||||| |||||| ||||| | || || || || ||||| || ||||| ||
Sbjct 21916 CG--ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 21859
Query 41851 GAA 41853
|||
Sbjct 21858 GAA 21856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303514580800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |