Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq21 105 7e-18 >seq21 Length=3175452 Score = 105 bits (116), Expect = 7e-18 Identities = 234/346 (68%), Gaps = 4/346 (1%) Strand=Plus/Minus Query 16940 TGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTG 16999 || || ||||||| | || ||| ||||| |||||| || | |||||||| | | Sbjct 2034969 TGCTTGAGATGTTGCAGCAGCAGGCATGCAAAATCGGTGTGCATGCCCTCGTCACGAGAG 2034910 Query 17000 ATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATC 17059 || ||||| || ||||| || | || |||||| || |||| | ||| || || Sbjct 2034909 ATGAGTTCATTTGAAAAGGTAAGGCCCGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATT 2034850 Query 17060 GCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCG 17119 || ||||||||||| |||||||| ||||||||||||| ||| || || | | ||||| Sbjct 2034849 GCAGCGAACGACCCGGAAAAGAAGATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGA 2034790 Query 17120 GCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGG-CTTTTTGCTTTAT 17178 || | || | || |||| ||||| || | |||| |||| ||| |||| || Sbjct 2034789 GCAAAGGTGGACTCCTTGTCGGAGATCCACCTCAGAGCCCAGTCGGCCTTCTTGC-GGAT 2034731 Query 17179 GCAATCCATCGTTTCTATGGCCTTAAATA-ATTTCTCTTTTTCCTGTAGGTCGATTATAT 17237 ||| || || || || || | || | | | || || || | |||| | | | Sbjct 2034730 GCAGGGGATGGTGTCGATAGCATCGAACAGGTATGTC-TTCTCTTTGGGGTCCTTCACGT 2034672 Query 17238 ACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCAT 17283 | || |||||||| || ||||| || ||||| ||||||||||| Sbjct 2034671 AGGTGTCGATGAGGAGTGAATACATCTCCGAGTGGATGTTCTCCAT 2034626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545451205640