Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq10 150 2e-31 >seq10 Length=3900288 Score = 150 bits (166), Expect = 2e-31 Identities = 274/399 (69%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | ||| || |||||||| ||||| || || ||||||| | Sbjct 1102813 ACGTAGAACTGGGCGAACATGTGACACGGCGGCAGCGCCATCTTGGACAAGTCCGCCACG 1102872 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 ||||| ||| |||||| || |||||| | ||||||| |||| | || | | | Sbjct 1102873 TTCCACGCGCTGAGGATGATCCTCCTATCGTAGGGGTTCGTCTTCAACTTGCGCACGATT 1102932 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 ||| ||| ||| |||||||| || ||| || ||||| ||||| ||| || Sbjct 1102933 TCCTTGATCTGATCCACGCCTTGGCCCGTATAGTCTGTTCGACAGTCCGTGTATTGTGCG 1102992 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC----CCTGTG 146105 ||||| || | ||||||||| || || ||||| || ||||| || ||| || ||| Sbjct 1102993 CCGAAATGGCGCCACTGGAAGCCATACACGGGGCCTAGGTCGCCTTCCTCGCGTCCAGTG 1103052 Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 ||||| | | ||||||| ||||| ||||||||| |||||||||| | || ||| Sbjct 1103053 ---AAGCCC-AACTTGTCGAGGAATTCCCGCGACCCGTTGCCGTCCCAGATGTGGATGCC 1103108 Query 146166 CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAG 146225 | | ||||| |||||| |||| | || | ||||||||| |||||| | Sbjct 1103109 CGCGTCAGAGAGTGGTTTGGAGGTCGTGCAGCCTGACACGAACCAGAGGAGCTCTGTGGT 1103168 Query 146226 GACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 ||| | | |||||| | ||||||||| || || || Sbjct 1103169 GACGGCGCGGAGGAAGACGCGCTTGGTGGTGAGAAGAGG 1103207 Score = 84.2 bits (92), Expect = 3e-11 Identities = 120/168 (71%), Gaps = 6/168 (4%) Strand=Plus/Plus Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739 ||||| || || | ||||| |||||||||||||||||| |||| | |||||| | || Sbjct 1102527 CTTCAAGGCGTCGATGTGGTCGAGGTAGACGTGCGCGTCGCCCATGGTGTGGATCAGCTC 1102586 Query 145740 CCCGGGCTCGA---GGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGC 145796 ||||| | | || || || || | ||| | |||||||| | ||| ||| Sbjct 1102587 GCCGGGTACCAAATCGCACG---CATGAGCCAGCATATGTGTCAGCAGTGCGTACGAGGC 1102643 Query 145797 TATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAG 145844 ||||| |||||||| || |||||||| || | || |||||||| || Sbjct 1102644 GATGTTAAAGGGCACGCCGAGCCCCATATCGCAGGACCGCTGGTATAG 1102691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076630352920