Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq21 226 3e-54 seq12 129 6e-25 seq9 120 3e-22 >seq21 Length=3175452 Score = 226 bits (250), Expect = 3e-54 Identities = 516/787 (66%), Gaps = 61/787 (8%) Strand=Plus/Plus Query 116638 GTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTC 116697 |||| |||||||||| |||||||| || ||||| | || || || || ||||| Sbjct 2034339 GTGGAACATGTACAAACGTGCCGAGGCTAGCTTTTGGACAGCAGAAGAAGTCGATCTGTC 2034398 Query 116698 CAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 ||||| | ||| ||| | || ||||| || | |||||| | ||| || || Sbjct 2034399 AAAGGATCTGCACGATTGGCACAACCGACTGAACAACGATGAGCGCTACTTCGTCTCCCA 2034458 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 ||| || ||||| ||||| || ||||| |||||||||||||||||| | |||||||| Sbjct 2034459 CGTTCTTGCCTTCTTCGCTGCTTCAGACGGTATCGTCAACGAGAATCTGCTGGAGCGTTT 2034518 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG------------------ 116856 | || |||||||| | ||||| || |||||||| || Sbjct 2034519 TAGTGCCGAAGTGCAGGTCCCTGAGGCACGCTGCTTCTATGGGTACGCGTCCATGTCCCC 2034578 Query 116857 ----------------------------------CTTTCAGATCGCCATGGAGAACGTGC 116882 ||||||| || ||||||||| | | Sbjct 2034579 TACACTGCTGCCTCAGACACTAATGGCTTCGCAGCTTTCAGGTCATGATGGAGAACATCC 2034638 Query 116883 ACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCC 116942 ||||||| |||||||| |||||||||||| |||||| | | |||||| Sbjct 2034639 ACTCGGAGATGTATTCACTCCTCATCGACACCTACGTGAAGGACCCCAAAGAGAAGACAT 2034698 Query 116943 GTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGC 117002 |||| | || ||||| || || || ||| || |||||||||| ||||| ||| Sbjct 2034699 ACCTGTTCGATGCTATCGACACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGA 2034758 Query 117003 GCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCG 117062 | |||||| ||| || ||| || |||| | | || ||||| || ||||| ||||||| Sbjct 2034759 GGTGGATCTCCGACAAGGAGTCCACCTTTGCTCAACGACTGGTTGCTTTCGCAGCCGTCG 2034818 Query 117063 AGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCA 117122 |||| |||||||||| || ||||| || || || |||||||||| ||||| | Sbjct 2034819 AGGGTATCTTCTTTTCCGGGTCGTTCGCTGCAATCTTCTGGCTCAAGAGCAAGGGCCTGA 2034878 Query 117123 TGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGA 117180 |||| ||||| || ||||| || || |||||||| | |||||||| |||| ||| Sbjct 2034879 TGCCGGGCCTTACCTTTTCA--AATGAACTCATCTCTCGTGACGAGGGCATGCACACCGA 2034936 Query 117181 CTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCA-GCGACCGAGCGCGGCGCGCGTCAGGG 117239 ||||| || ||||| | | ||| | ||| | |||| | | || | || | Sbjct 2034937 TTTTGCATGCCTGCTGCTGCAACATCTCAAGCACAAGCCCGATC-CAAAGCTCATCGAGA 2034995 Query 117240 AGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGC 117299 | || ||||||| || ||||| ||||| || ||| | ||||||||||| || || Sbjct 2034996 ACGTCATCACCGAGGCAGTCGCTATCGAAAAGGAGTTCTTAACCGAAGCGCTCCCTGTCG 2035055 Query 117300 GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGC 117359 || ||||||| | || | | | |||| || ||||| ||||| ||||||||| | Sbjct 2035056 GTTTGCTGGGCATGAACTCCAAGCTTATGTGTCAGTACATTGAGTTTGTCGCCGACCGTT 2035115 Query 117360 TGCTGCT 117366 ||||||| Sbjct 2035116 TGCTGCT 2035122 >seq12 Length=2267901 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || || || ||||| |||||||| | || ||||| ||| | Sbjct 993846 ATGCAGATTTTCGTAAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 993905 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| || ||||| || | || ||| Sbjct 993906 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 993965 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || |||||||| || || | |||||||| | |||||||||| Sbjct 993966 CAGCGCCTCATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 994025 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||| ||| | || || || || || Sbjct 994026 ATCCAGAAAGAGTCAACCCTACACCTGGT 994054 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| | || ||||| || ||||| |||| || ||| | | Sbjct 994302 ATGCAAATCTTTGTCAAAACCTTGACTGGCAAGACGATCACACTCGAGGTTGAATCTTCA 994361 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| || || ||||||||||| ||||||| Sbjct 994362 GACACAATTGACAACG-TCAAGACGAAGATTCAGGATAAGGAGGGCATCCCACCGGACCA 994420 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| || || ||||| || |||| || || ||| || ||||| Sbjct 994421 ACAACGATTGATCTTCGCTGGTAAGCAGCTTGAAGACGGCCGTACACTCTCAGATTACAA 994480 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| |||||||| || Sbjct 994481 CATCCAGAAGGAATCCACTCTGCATCTCGT 994510 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| |||||||| |||| || || ||| Sbjct 994074 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCAGT 994133 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| || || || ||||| || | || || Sbjct 994134 GACACCATCGACAACG-TCAAGAGCAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCA 994192 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||||| || || || || || || || | |||||||| ||||||||| Sbjct 994193 GCAACGTCTCATCTTTGCCGGAAAGCAACTCGAGGATGGTCGCACCCTTTCCGACTACAA 994252 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || |||| || ||||| || Sbjct 994253 CATCCAGAAAGAATCCACTCTCCATCTCGT 994282 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| || || || | || || || | | Sbjct 994530 ATGCAGATTTTTGTCAAGACCCTGACTGGCAAGACTATTACGCTGGAAGTTGAGAGCTCA 994589 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||| || || | ||||| ||||| ||||| | ||||| Sbjct 994590 GACACCATCGACAACG-TCAAATCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCA 994648 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||| |||| || ||||| || || || || | || ||||| ||||||||| Sbjct 994649 GCAGAGACTGATCTTTGCCGGCAAGCAACTTGAGGATGGCCGGACCCTATCCGACTACAA 994708 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| ||| |||| Sbjct 994709 CATCCAGAAGGAGAGCACCTTGCA 994732 >seq9 Length=4529175 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| |||| |||||| || |||||| | Sbjct 3500875 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCCGACACGATC 3500934 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | |||| || || | ||||| || |||||||| |||||||||| || | Sbjct 3500935 GACAATGTCAAATCCAAGATCCAGGACAAGGAAGGCATCCCACCGGACCAGCAGCGGTTG 3500994 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||||||||| || || || || | || || || | ||||||||| ||||||||| Sbjct 3500995 ATCTTCGCGGGCAAGCAACTCGAGGATGGCCGGACGCTGAGCGACTACAATATCCAGAAG 3501054 Query 40879 G 40879 | Sbjct 3501055 G 3501055 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || || ||||| | |||||||| || || |||| ||| ||||| || || || Sbjct 1601800 GACAAGGAAGGGATCCCTCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAACTCGAA 1601741 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||||| || ||||||||||||||||||||| | || || || || || || Sbjct 1601740 GACGGCCGCACGCTTTCCGACTACAACATCCAGAAGGAATCGACCCTTCACCTGGTCCTG 1601681 Query 40903 CG 40904 || Sbjct 1601680 CG 1601679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219051874480