Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq12 86.0 5e-12 >seq12 Length=2267901 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || || |||||||| || ||||||||||||| | || || ||| || | ||| Sbjct 994276 TGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCGAGTTGC 994217 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAAT-TTG 18241 || || ||| |||| || | ||| ||||| || | |||||||||||| ||| ||| Sbjct 994216 TTTCCGGCAAAGATGAGACGTTGCTGATCTGGAGGAATGCCTTCCTTATCTTGAATCTTG 994157 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 | |||||| | | | ||||||| || ||| || | |||||| | ||||| || Sbjct 994156 CT-CTTGACGTTGTCGATGGTGTCACTGGACTCAACCTCGAGAGTGATGGTCTTGCCAGT 994098 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 || || || || || |||||||| Sbjct 994097 CAGGGTCTTCACGAAGATTTGCAT 994074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343893665135