Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq10 127 4e-24 >seq10 Length=3900288 Score = 127 bits (140), Expect = 4e-24 Identities = 179/249 (72%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| ||||||||||| || || | ||| ||||| || || |||||||| ||| Sbjct 3135309 CCACCAGCTGTCTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATACCCTCGATG 3135250 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACA 94910 || || || | | | | | | |||||| ||||| || ||||| |||| | ||||| Sbjct 3135249 CTGTCCTCCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGC-GTTCCCGC 3135191 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| || ||||| ||||| ||||| || || | | | |||||||||| ||||| || Sbjct 3135190 ATTGAAGAGTGTCGGGGATGCATGAGTGAAGCACTTCTGGGACATGAGATTGTATGTCTC 3135131 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 ||| | | || || ||||| |||||||||||||||||||| ||||| | ||| Sbjct 3135130 GATGGCCTTCTCAATATCGTCGCCGTGGATGCCGACAGCCACACGCATGATCATATGCTG 3135071 Query 95031 AGGGCGCTC 95039 || || || Sbjct 3135070 TGGTCGTTC 3135062 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 93609 ATACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGA 93668 ||| |||||||| || | ||||||||| |||| |||||| || ||||| | || || Sbjct 3136447 ATAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTTGA 3136388 Query 93669 TGCAGTAGGCATGGGAGCAACAAACATTGAATTGTGAACACCATACTTCATAATGTC--C 93726 || ||||||||||||||||||| || || ||| |||| || || || |||||| | Sbjct 3136387 CGCGGTAGGCATGGGAGCAACAAGCAGAGAGTTGCGAACCCCGTATTTGGCAATGTCGGC 3136328 Query 93727 CTTC 93730 |||| Sbjct 3136327 CTTC 3136324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583708381965