Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq10 174 2e-38
>seq10
Length=3900288
Score = 174 bits (192), Expect = 2e-38
Identities = 366/538 (68%), Gaps = 16/538 (3%)
Strand=Plus/Minus
Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230
||||| || |||||||| ||||| | | | || || || || || || ||||| || | |
Sbjct 3135483 TGCCAGGGCTCCAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGCCCTGGTCGACG 3135424
Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290
|| | || |||||||| | || | | ||| ||||| | ||||| || || ||||||
Sbjct 3135423 TAGCGGGCCGTGTTATTGAACACACGGAGCATGGGAATGAGGCCATTTGAGGTTCCATTG 3135364
Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCCC 66348
|| || | |||||| ||| |||||||||| | | ||||| | || || || |
Sbjct 3135363 GTTCCTGCAATATAGGATCCCGTTGCACGAATGCAGTGAGCATTGA--GGCCAATACCAC 3135306
Query 66349 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGCCCTCTATACTA 66407
| || | || ||||| | || || ||| || | || || ||||| ||||| || ||
Sbjct 3135305 CAGCTGTCTTGGAGATCATGGCACA-CGTCTTGAGAGTGTCGTAGATACCCTCGATGCTG 3135247
Query 66408 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 66467
|| ||| |||||| | | || ||| || | ||| | | |||||||||||
Sbjct 3135246 TCCTCCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGCGTTCCCGCATTG 3135187
Query 66468 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 66527
|| | || || || || || || || || || | || | |||||||| ||||| ||
Sbjct 3135186 AAGAGTGTCGGGGATGCATGAGTGAAGCACTTCTGGGACATGAGATTGTATGTCTCGATG 3135127
Query 66528 GCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 66583
|| || ||||| || | |||| || || || |||||||| | ||| |||||
Sbjct 3135126 GCCTTCTCAATATCGTCGCCGTGGATG----CCGACAGCCACACGCATGATCATATGCTG 3135071
Query 66584 AGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 66642
|||| ||| ||| |||| ||| || || | || ||| ||||| ||||| || ||||
Sbjct 3135070 TGGTCGTTCGGCGA-CTTGCTTGCCGATCTTGAGCAGGTATGATTTCTCCAACGTCTTAA 3135012
Query 66643 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 66700
| ||||| || | ||| ||||| || ||||| | || |||||||||||| |||
Sbjct 3135011 AGCCAAAGTATTGGTAGTTGAAGTCCCGGTCGTAGACGATGGCCGAGTTGAGTTCATC 3134954
Score = 84.2 bits (92), Expect = 3e-11
Identities = 195/291 (67%), Gaps = 5/291 (2%)
Strand=Plus/Minus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
|||||||||||||| | || | | || || || |||||||| || || || |||
Sbjct 3136824 GTGAATTGAATGGGTTGTGTGGCAGCCATGGTGCGGAGGTAGTACATGCCGGTCTTGAGA 3136765
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958
|| | |||| || ||| ||||| || | |||| |||| || |
Sbjct 3136764 CCCATCTTCCAGCCAGCAAAGTGCATGGATGTGATTTTGCCCATGGTCGGTTCCTTCAAG 3136705
Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018
||||| |||| |||||| || ||||||||||| || | |||||| ||||||| | |
Sbjct 3136704 TGGATGTTCAGAGATTGGGACTGGTCGATGAAGGCACCTCGGTCTGCCGCCATTTGGAGG 3136645
Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAG 65077
|| ||| ||| |||||||| | ||| || || ||| | ||| || || | || |
Sbjct 3136644 ATTGTCCGTTGACTGATTTCCCAGACAGTCTTGTACAACGC-CTTGATGTCAGCAGGGAT 3136586
Query 65078 GTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 65125
||| | | ||||||| || |||||||| || ||||| | ||||| ||
Sbjct 3136585 GTTGGGGATGTTCTGAACTGAACCACCATCGGCGATAATACGGTTCTTCAT 3136535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172610775320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |