Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq10 190 3e-43 seq21 113 6e-20 >seq10 Length=3900288 Score = 190 bits (210), Expect = 3e-43 Identities = 1118/1766 (63%), Gaps = 39/1766 (2%) Strand=Plus/Minus Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 ||||| |||| |||||| || ||||||||||| || | |||||| ||||||| | | Sbjct 3136704 TGGATGTTCAGAGATTGGGACTGGTCGATGAAGGCACCTCGGTCTGCCGCCATTTGGAGG 3136645 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAG 78956 || ||| ||| |||||||| | ||| || || ||| | ||| || || | || | Sbjct 3136644 ATTGTCCGTTGACTGATTTCCCAGACAGTCTTGTACAACGC-CTTGATGTCAGCAGGGAT 3136586 Query 78957 GTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013 ||| | | ||||||| || |||||||| || ||||| | ||||| || | || Sbjct 3136585 GTTGGGGATGTTCTGAACTGAACCACCATCGGCGATAATACGGTTCTTCATGTTGTCTGA 3136526 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| | ||| | | | | || || || || || ||||| || || Sbjct 3136525 CCAGAGGCCAAGGTCGACCAGGTCCTTCAACAGCCATGGGTTGACGACCTGAAACTCACC 3136466 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 || || || | || | || || || |||||||| || | |||| || || || Sbjct 3136465 AGCCAGGACACGGCGGGAATAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCC 3136406 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 | ||| || | ||||| || || ||||| || || || | | | || | || || Sbjct 3136405 AAGAATCTGCGAGGTTGACGCGGTAGGCATGGGAGCAACAAGCAGAGAGTTGCGAACCCC 3136346 Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253 |||| || | | || || || ||||| ||||| || || || || |||||| Sbjct 3136345 GTATTTGGCAATGTCGGCCTTCAGTGAGTCCCAGTCCCACAGGTCGGAAGGAGTAACATT 3136286 Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGT-GTATGTTTCATAAG 79312 ||| | || ||||| ||| | || || || | | ||| | |||||||||||| | Sbjct 3136285 CCACATGTCGTATTGGAGAGTGCC-TTGGGAGACTGGGCTCCCCTCGTATGTTTCATAGG 3136227 Query 79313 GTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372 |||| || || | || || || | || ||| |||||||| || | Sbjct 3136226 CGCCTTGCTCCCTTGCAAGCTCGCATGAAGCAGTGAGAGCAGCGTGGTAAATGGTCTCAA 3136167 Query 79373 AAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAA 79432 | |||| | ||||| | | | || || | ||||| || | | | || | Sbjct 3136166 AGATCTGGATGTTGAGTTGTCGAGCCTCCGGAGAGTCAAAGGGCAGACGCAGGGCAAGGA 3136107 Query 79433 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTT 79492 | || || || | ||||||||||||| ||| ||||| | |||| | | || | | Sbjct 3136106 ATGCATCAGCAAGACCTTGAACACCAAGACCAATAGGGCGGTGTCGCATGTTGCTCTTCT 3136047 Query 79493 CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTA 79552 || ||||| | |||||| || || || || || || || || | ||| | | | | Sbjct 3136046 TGGCCTCTGGCACAGGATAGTAGTTGATGTCGATGATCTTGTTCAAATTGCGGGTCACCA 3135987 Query 79553 CTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT------CGTCCATCTATTACAAACA 79606 ||| | || || | || | || ||| | || || | ||||| Sbjct 3135986 CTTGGGTGACCTCGTGGAGGCGGCCGAAGTCATACTCGCCACGGCCTTGGTCGACAAAGG 3135927 Query 79607 TGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 79666 | | || | ||| |||||||| || || || ||||||| | | | || | | Sbjct 3135926 TTGGAAGAGCCAGAGAAGCCAGATTGCAGACAGCAACCTCATCCGGGGCTGTGTACTCGA 3135867 Query 79667 TTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTT 79726 || || |||||||| || | ||||||||| || || | || || ||||| Sbjct 3135866 CAATCTCGGTGCAGAGATTGGAGCTTCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCC 3135807 Query 79727 TGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAA 79786 |||| || |||||||| || || ||| | |||||||| || ||| |||| | || | | Sbjct 3135806 TGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGA 3135747 Query 79787 TCGCTTTCCAGACGACTC-GAGCCTTTATTATA-GACTTGTATCTCTTTTCTCTTTCGTA 79844 | || | ||| | | || | ||||| | | | ||| | | | || ||||||| Sbjct 3135746 TGGCATACCACA-GCTTCTGGGCCTTGACTGTCTGACGGCCACGGCCCTCCT-TTTCGTA 3135689 Query 79845 T-TGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCG 79902 | | | ||| | || || ||| ||||| || | |||||| | | || ||| ||| Sbjct 3135688 TCTCTCGTAGAGC-TCCTT-GAAGTCGTCGCCGTACACATCGGCAAGACCTGGAGCTTCA 3135631 Query 79903 TCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGA 79962 | ||| || | | | ||| || | | || || || | ||| || | || ||| Sbjct 3135630 TGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCGGGA 3135571 Query 79963 ATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTT 80021 |||| | || ||| || | || | | | ||||| || || |||||| | Sbjct 3135570 GTCCACATCGC-ATAGAACAAGTCACGAGCCCGGATTTCCTCCTTGCCGTGGTTCTTTCT 3135512 Query 80022 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCC 80081 || | | |||| | | | ||| | ||||| || |||||||| ||||| | | | || Sbjct 3135511 TAGGTTCAAGAACTCAAAGACATCGGCGTGCCAGGGCTCCAAGTAGATGGCGAAAGCGCC 3135452 Query 80082 CGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 80141 |||||| || || || ||||| || | ||| | || |||||||| | || | | ||| Sbjct 3135451 CGGTCGCTTATTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTATTGAACACACGGAGCAT 3135392 Query 80142 TGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 80201 ||||| | ||||| || || |||||||| || | |||||| ||| | |||||||| Sbjct 3135391 GGGAATGAGGCCATTTGAGGTTCCATTGGTTCCTGCAATATAGGATCCCGTTGCACGAAT 3135332 Query 80202 --ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 80259 | | ||||| | || || || || || | || ||||| | || || ||| || Sbjct 3135331 GCAGTGAGCATTGA--GGCCAATACCACCAGCTGTCTTGGAGATCATGGCACA-CGTCTT 3135275 Query 80260 AAC-GTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGA 80318 | || || ||||| ||||| ||||| || || |||||| | | || ||| || Sbjct 3135274 GAGAGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCAGGAGGA 3135215 Query 80319 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 80378 | ||| | | ||||||||||| || | || || || || || || || || || Sbjct 3135214 TAGCTGGGGCTGTGGCGTTCCCGCATTGAAGAGTGTCGGGGATGCATGAGTGAAGCACTT 3135155 Query 80379 TTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC----CCATTGATGAATTC 80434 | |||| |||||||| ||||| || || || ||||| || | |||| | Sbjct 3135154 CTGGGACATGAGATTGTATGTCTCGATGGCCTTCTCAATATCGTCGCCGTGGATG----C 3135099 Query 80435 CTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTATTTATTTTC 80493 | || || |||||||| | ||| ||||| |||| ||| ||| |||| || || || Sbjct 3135098 CGACAGCCACACGCATGATCATATGCTGTGGTCGTTCGGCGA-CTTGCTTGCCGATCTTG 3135040 Query 80494 AACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCG 80553 | || ||| ||||| ||||| || ||||| ||||| || | ||| ||||| || ||| Sbjct 3135039 AGCAGGTATGATTTCTCCAACGTCTTAAAGCCAAAGTATTGGTAGTTGAAGTCCCGGTCG 3134980 Query 80554 TAAATAATAACCGAGTTGAGTTTATC 80579 || | || |||||||||||| ||| Sbjct 3134979 TAGACGATGGCCGAGTTGAGTTCATC 3134954 >seq21 Length=3175452 Score = 113 bits (124), Expect = 6e-20 Identities = 227/336 (68%), Gaps = 3/336 (1%) Strand=Plus/Minus Query 49944 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 50003 ||||| | || || ||||| |||||| ||||| |||||||| | | || ||||| Sbjct 2034961 ATGTTGCAGCAGCAGGCATGCAAAATCGGTGTGCATGCCCTCGTCACGAGAGATGAGTTC 2034902 Query 50004 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 50063 || ||||| || || || ||||| ||||| | || ||||| || || | || || Sbjct 2034901 ATTTGAAAAGGTAAGGCCCGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATTGCAGCGAA 2034842 Query 50064 TGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACT 50123 ||||| ||||||||||| || || || || || || ||||| |||| | || | | Sbjct 2034841 CGACCCGGAAAAGAAGATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCAAAGGT 2034782 Query 50124 GG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 50180 || | |||| |||||| | ||||||| ||||||||||| | || || || Sbjct 2034781 GGACTCCTTGTCGGAGATCCACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGAT 2034722 Query 50181 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 50240 || || || |||| || || || | || || || || || || || || ||||| Sbjct 2034721 GGTGTCGATAGCATCGAACAGGTATGTCTTCTCTTTGGGGTCCTTCACGTAGGTGTCGAT 2034662 Query 50241 CAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 50276 | || |||||| ||||| || ||||| || || Sbjct 2034661 GAGGAGTGAATACATCTCCGAGTGGATGTTCTCCAT 2034626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268593497720