Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 2e-11 >seq21 Length=3175452 Score = 84.2 bits (92), Expect = 2e-11 Identities = 213/322 (66%), Gaps = 4/322 (1%) Strand=Plus/Minus Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 || |||||||| || | |||||| || | | || ||||| |||||||| || | Sbjct 2034945 CATGCAAAATCGGTGTGCATGCCCTCGTCACGAGAGATGAGTTCATTTGAAAAGGTAAGG 2034886 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991 || ||||||| || | || | ||| || |||||||| || |||||||||||||| Sbjct 2034885 CCCGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATTGCAGCGAACGACCCGGAAAAGAAG 2034826 Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT 14051 || ||||| || || || || || | | ||||| |||| | | | |||| || Sbjct 2034825 ATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCAAAGGTGGACTCCTTGTCGGAG 2034766 Query 14052 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTA 14111 ||||| | |||||| || | || || || | || || || ||||||| Sbjct 2034765 ATCCACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTGTCGATAGCATCG 2034706 Query 14112 AATAAATATTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14169 || | ||| ||||||||| || ||| | ||| || || || || | ||||| Sbjct 2034705 AACAGGTATGTCTTCTCTTTGGGGTCCTT--CACGTAGGTGTCGATGAGGAGTGAATACA 2034648 Query 14170 TTTCAGAGTGTATGTTTTCCAT 14191 | || ||||| ||||| ||||| Sbjct 2034647 TCTCCGAGTGGATGTTCTCCAT 2034626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727862078200